Table 2.
CD4 and CD8 naïve and memory cell sorting.
Donor | Age | Group | Subset | Replica | Number of sorted cells | Number of CDR3 reads | Number of CDR3 clonotypes |
---|---|---|---|---|---|---|---|
Donor 1 | 25 | Young | CD4 | 1 | 500,000 | 528,824 | 38,614 |
2 | 500,000 | 475,392 | 240,80 | ||||
CD8 | 1 | 500,000 | 564,227 | 26,988 | |||
2 | 500,000 | 648,821 | 19,338 | ||||
Donor 2 | 26 | CD4 | 1 | 135,000 | 1,069,588 | 45,098 | |
CD8 | 1 | 251,000 | 633,854 | 28,967 | |||
Donor 3 | 35 | CD4 | 1 | 200,500 | 380,253 | 43,526 | |
2 | 231,000 | 223,661 | 23,038 | ||||
CD8 | 1 | 350,500 | 533,091 | 47,626 | |||
Donor 4 | 32 | CD4 | 1 | 560,000 | 17,494,455 | 165,184 | |
2 | 488,000 | 12,525,047 | 113,333 | ||||
3 | 395,000 | 6,077,772 | 54,546 | ||||
4 | 100,000 | 4,353,149 | 24,582 | ||||
CD8 | 1 | 510,000 | 9,219,066 | 101,096 | |||
2 | 316,000 | 10,594,890 | 61,022 | ||||
Donor 5 | 51 | Old | CD4 | 1 | 495,000 | 13,765,788 | 183,873 |
2 | 425,000 | 5,146,822 | 64,134 | ||||
3 | 437,000 | 3,832,144 | 84,458 | ||||
4 | 255,000 | 4,773,131 | 90,459 | ||||
CD8 | 1 | 509,000 | 7,369,930 | 125,339 | |||
2 | 200,000 | 2,689,594 | 64,907 | ||||
3 | 343,000 | 517,265 | 20,870 | ||||
4 | 120,000 | 1,945,472 | 32,259 | ||||
Donor 6 | 88 | CD4 | 1 | 500,000 | 779,559 | 65,515 | |
CD8 | 1 | 60,000 | 142,639 | 9,991 | |||
Donor 7 | 51 | CD4 | 1 | 100,000 | 28,129 | 5,033 | |
2 | 100,000 | 37,556 | 5,455 | ||||
3 | 100,000 | 41,380 | 6,762 | ||||
CD8 | 1 | 105,000 | 51,463 | 7,434 | |||
Donor 8 | 82 | CD4 | 1 | 100,000 | 46,472 | 8,318 | |
2 | 90,000 | 38,109 | 6,694 | ||||
CD8 | 1 | 12,000 | 6,013 | 846 | |||
Donor 9 | 55 | CD4 | 1 | 100,000 | 82,691 | 7,768 | |
2 | 100,000 | 27,215 | 4,740 | ||||
CD8 | 1 | 100,000 | 51,742 | 5,290 | |||
2 | 100,000 | 84,532 | 7,666 | ||||
Donor 10 | 77 | CD4 | 1 | 254,000 | 677,587 | 24,652 | |
CD4 | 2 | 227,000 | 963,394 | 20,087 | |||
CD8 | 1 | 50,000 | 942,430 | 15,033 | |||
CD8 | 2 | 105,000 | 553,867 | 19,180 | |||
Donor 11 | 53 | CD4 | 1 | 153,000 | 401,550 | 11,668 | |
53 | CD8 | 1 | 101,000 | 242,248 | 6,857 |
Donors, replicas, sorted cell counts, and number of extracted T-cell receptor beta CDR3 clonotypes are shown.