Skip to main content
. 2018 Jul 24;6:78. doi: 10.3389/fcell.2018.00078

Table 3.

Long non-coding RNAs (p < 0.05) in human follicle development.

Oocytes from primordial follicles Primordial follicle
Symbol*1 FPKM mean t-test (p-value) Symbol FPKM mean t-test (p-value)
PRIMORDIAL FOLLICLES
ADCY10P1 0.763 0.046 BDNF-AS 2.395 0.017
LINC00485 2.7643 0.046 FGD5-AS1 3.335 0.013
LINC00924 0.171 0.015 GLG1 2.640 0.007
LINC01128 5.889 0.009 LINC00221 3.800 0.012
LINC01511 6.533 0.019 LINC00485 2.770 0.007
LOC100129434 6.859 0.0036 LINC00707 4.801 0.041
LOC100507557 3.783 0.005 LINC01483 2.976 0.040
LOC101927487 4.044 0.036 LOC100129434 6.765 0.012
LOC101928137 2.656 0.029 LOC100506885 3.548 0.028
LOC101929128 4.250 0.023 LOC100507156 2.776 0.013
LOC101929567 4.773 0.014 LOC100507557 2.443 0.018
LOC101929612 3.972 0.005 LOC101926943 1.428 0.008
LOC102467226 0.335 0.016 LOC101927487 3.216 0.035
LOC284798 2.494 0.002 LOC101928137 1.999 0.012
MALAT1 7.954 0.006 LOC101929567 3.513 0.033
MIR3609 5.490 0.012 LOC101929612 3.197 0.005
MIR99AHG 0.262 0.016 LOC440300 1.490 0.041
NPY6R 0.211 0.013 LOC643201 4.491 0.034
OIP5-AS1 4.190 0.029 MALAT1 8.992 0.026
RN7SK 11.285 0.005 MGC32805 0.219 0.039
RN7SL2 8.794 0.012 MIR4426 0.622 0.018
RPS3A 1.279 0.021 OIP5-AS1 5.527 0.033
UGDH-AS1 6.637 0.013 RN7SK 11.227 0.001
XIST 5.393 0.026 RN7SL2 8.9514 0.001
RPL13AP5 2.322 0.002
RPL21P28 0.582 0.012
RPS3A 1.118 0.043
SCARNA7 5.888 0.039
SLC8A1-AS1 5.409 0.007
SYN2 4.108 0.043
TUNAR 3.893 0.047
UBXN8 2.491 0.050
UGDH-AS1 6.382 0.006
XIST 8.236 0.003
ZFAS1 4.296 0.014
ZNF252P 3.537 0.038
Oocytes from primary follciles Primary follicle
Symbol FPKM mean t-test (p-value) Symbol FPKM mean t-test (p-value)
PRIMARY FOLLICLES
BCAR4 4.563 0.008 CEACAM22P 0.182 0.033
LINC00485 1.902 0.002 GLG1 1.270 0.046
LINC00665 4.298 0.046 KIZ 4.874 0.014
LINC01511 4.625 0.016 LINC01511 5.425 0.028
LOC100129434 6.444 0.011 LOC100129434 5.792 0.047
LOC100506885 2.187 0.039 LOC100507557 1.854 0.041
LOC101926943 1.548 0.044 LOC101927487 3.822 0.007
LOC101927337 2.226 0.014 LOC101929567 4.053 0.049
LOC101929491 0.330 0.004 LOC101929612 3.456 0.010
LOC101929567 4.287 0.008 MALAT1 9.345 0.016
LOC101929612 3.152 0.016 NEXN-AS1 0.534 0.046
LOC102546299 2.551 0.001 OIP5-AS1 5.950 0.017
MALAT1 9.614 0.001 RN7SK 11.308 0.004
MEG3 0.220 0.024 RN7SL2 8.743 0.001
MIR3609 3.887 0.012 RPL13AP5 2.877 0.003
MIR4426 0.595 0.020 RPL21P28 0.868 0.008
RN7SK 11.845 0.001 RPL21P28 2.165 0.032
RN7SL2 9.110 0.004 SNORD89 1.513 0.034
RPL13AP5 1.418 0.011 UGDH-AS1 6.216 0.016
RPL21P28 0.916 0.047 XIST 7.610 0.030
RPS3A 0.894 0.007 ZFAS1 5.249 0.005
SCARNA7 5.424 0.009
UGDH-AS1 6.397 0.003
XIST 6.751 0.014
ZNF518A 2.983 0.018
Mural granulosa cell Theca cells
Symbol FPKM mean t-test (p-value) Symbol FPKM mean t-test (p-value)
SMALL ANTRAL
ANP32AP1 0.683 0.009 ANKRD36B 2.277 0.020
CASP8AP2 3.530 0.034 BCYRN1 2.661 0.034
CROCCP2 1.453 0.006 BDNF-AS 2.317 0.033
EBLN3 3.812 0.002 CD27-AS1 2.007 0.041
FGD5-AS1 4.032 0.019 CLEC2D 1.283 0.027
GOLGA6L5P 1.750 0.015 CSNK1A1 2.753 0.001
H3F3AP4 2.121 0.027 CTBP1-AS2 2.457 0.028
LINC00657 5.467 0.009 FGD5-AS1 3.506 0.045
LINC01128 4.413 0.018 FLJ42627 0.239 0.000
LINC01420 2.152 0.012 H3F3AP4 2.185 0.014
LOC100129434 3.831 0.025 HCG18 3.976 0.035
LOC100131564 2.425 0.024 HERC2P3 0.111 0.017
LOC100507557 1.904 0.028 LINC00485 1.467 0.049
LOC101927027 1.875 0.003 LINC00657 4.740 0.009
LOC101929124 3.0195 0.010 LINC01128 3.643 0.020
LOC101929612 3.418 0.007 LINC01133 0.111 0.017
LOC102477328 0.135 0.020 LOC100129434 4.893 0.008
LOC150776 3.000 0.002 LOC101929612 3.455 0.001
LOC643201 3.740 0.013 LOC102724699 0.420 0.021
LOC646762 2.431 0.008 MAGI2-AS3 2.791 0.020
LOC728554 1.619 0.023 MALAT1 10.73 0.000
MALAT1 9.495 0.006 MEG3 7.602 0.001
MIR3609 5.033 0.001 MIR3609 4.974 0.009
MIR99AHG 3.823 0.014 MIR4426 0.504 0.043
OIP5-AS1 5.926 0.003 MIR99AHG 5.083 0.008
PCBP1-AS1 2.541 0.029 NCBP2-AS2 0.824 0.001
PIGBOS1 1.804 0.011 NEXN-AS1 0.735 0.025
PKI55 4.600 0.000 NKAPP1 3.545 0.032
RN7SK 10.395 0.002 OIP5-AS1 4.636 0.039
RN7SL2 8.088 0.004 PCBP1-AS1 4.558 0.009
RPL13AP5 2.509 0.006 PDIA3P1 0.450 0.016
RPL21P28 2.293 0.012 PGM5P2 1.302 0.028
RPL21P28 0.589 0.026 PKI55 4.791 0.024
RPL34P6 0.405 0.013 PTOV1-AS1 2.060 0.001
RPS3A 2.326 0.001 RN7SK 10.57 0.005
SCAND2P 1.312 0.014 RN7SL2 8.740 0.006
SCARNA7 5.104 0.016 RNU4-2 4.075 0.007
SNHG17 3.099 0.018 RPL13AP5 2.816 0.011
TMEM120A 3.042 0.002 RPL21P28 2.840 0.006
TUG1 6.0234 0.003 RPL21P28 1.081 0.017
UGDH-AS1 3.874 0.031 RPL34P6 0.844 0.019
XIST 8.056 0.004 RPS3A 1.846 0.010
ZFAS1 5.124 0.005 SCARNA7 5.588 0.026
ZNF761 4.206 0.017 SDHAP2 2.223 0.001
ZNF826P 0.990 0.018 SH3BP5-AS1 2.069 0.008
SNORA23 0.659 0.007
SNORA79 1.713 0.039
SNORD89 2.354 0.017
SPON1 3.979 0.030
THUMPD3-AS1 0.829 0.049
TMEM120A 1.996 0.042
TUG1 6.154 0.008
UBXN8 4.509 0.006
UGDH-AS1 4.596 0.000
XIST 8.474 0.001
ZFAS1 4.881 0.013
ZNF252P 1.822 0.012
ZNF518A 2.901 0.020
ZSCAN26 3.800 0.007
Oocyte from small antral follicle
Symbol FPKM mean t-test (p-value)
LOC100653061 5.033 0.033
MALAT1 7.219 0.027
OIP5-AS1 0.842 0.007
PMS2CL 0.481 0.008
RN7SK 10.140 0.021
ROR1-AS1 0.481 0.008
*1

Genes alphabetically sorted.

*2Presented in heat map (Figure 2).