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. 2018 Feb 13;49(3):544–551. doi: 10.1016/j.bjm.2017.11.003

Table 1.

Primers used for polymerase chain reaction analysis.

Primer Sequence (5′–3′) PCR conditions Size of PCR product Reference
HEL-F AAC GAT GAA GCT TCT AGC TTG CTA Initial denaturation at 94 °C for 10 min; 35 cycles of 94 °C for 30 s, 56 °C for 1 min and 72 °C for 1 min; final extension of 72 °C for 10 min 399bp 12
HEL-R GTG CTT ATT CST NAG ATA CCG TCA T
glmM-F GGA TAA GCT TTT AGG GGT GTT AGG GG 294pb 13
glmM-R GCT TAC TTT CTA ACA CTA ACG CGC .
cagA-F1 GAT AAC AGG CAA GCT TTT GAG G Initial denaturation at 94 °C for 10 min; 40 cycles of 94 °C for 30 s, 58 °C for 30 s and 72 °C for 1 min; final extension of 72 °C for 10 min 349pb 14,15
cagA-B1 CTG CAA AAG ATT GTT TGG CAG A
VA1-F ATG GAA ATA CAA CAA ACA CAC 259pb 14
VA1-R CTG CTT G AATGC GCC AAAC
VA1-F ATG GAA ATA CAA CAA ACA CAC Initial denaturation at 94 °C for 10 min; 35 cycles of 94 °C for 30 s, 60 °C for 30 s and 72 °C for 30 s; final extension of 72 °C for 10 min. 286pb 14
VA1-R CTG CTT G AATGC GCC AAAC
VAG-F CAA TCT GTC CAA TCA AGC GAG 570pb 14
VAG-R GCG TCA AAT AAT T CCA AGG
VAG-F CAA TCT GTC CAA TCA AGC GAG 645pb 14
VAG-R GCG TCA AAT AAT T CCA AGG 14