Skip to main content
. 2018 Jul 31;7:e36740. doi: 10.7554/eLife.36740

Key resources table.

Reagent type
(species) or resource
Designation Source or reference Identifiers Additional information
Antibody Mouse Anti-alpha-Tubulin
Monoclonal Antibody,
Unconjugated, Clone
DM1A
Sigma-Aldrich T9026;
RRID:AB_477593
(1:500)
Antibody Anti-beta-Catenin
antibody produced in
rabbit
Sigma-Aldrich C2206;
RRID:AB_476831
(1:300)
Antibody Anti-Histone, H1 + core
proteins, clone
F152.C25.WJJ antibody
Millipore MABE71;
RRID:AB_10845941
(1:300)
Antibody anti-NvaPKC custom
peptide antibody
produced in rabbit
Bethyl labs;
Salinas-Saavedra et al. (2015)
Stored at MQ
Martindale's lab;
(1:100)
Antibody anti-NvLgl custom
peptide antibody
produced in rabbit
Bethyl labs;
Salinas-Saavedra et al. (2015)
Stored at MQ
Martindale's lab;
(1:100)
Antibody anti-NvPar-1 custom
peptide antibody
produced in rabbit
Bethyl labs;
Salinas-Saavedra et al. (2015)
Stored at MQ
Martindale's lab;
(1:100)
Antibody anti-NvPar-6 custom
peptide antibody
produced in rabbit
Bethyl labs;
Salinas-Saavedra et al. (2015)
Stored at MQ
Martindale's lab;
(1:100)
Antibody Goat anti-Mouse IgG
Secondary Antibody,
Alexa Fluor 568
Thermo Fisher Scientific A-11004;
RRID:AB_2534072
(1:250)
Antibody Goat anti-Rabbit IgG
Secondary Antibody,
Alexa Fluor 647
Thermo Fisher Scientific A-21245;
RRID:AB_2535813
(1:250)
Antibody Sheep Anti-Digoxigenin
Fab fragments Antibody,
AP Conjugated, Roche
Roche 11093274910;
RRID:AB_514497
Other Alexa Fluor 488 Phalloidin Thermo Fisher Scientific A12379;
RRID:AB_2315147
(1:200)
Other Texas Red Streptavidin Vector Laboratories SA-5006,
RRID:AB_2336754
(1:200)
Other DAPI (4',6-Diamidino-
2-Phenylindole,
Dihydrochloride)
Thermo Fisher Scientific D1306;
RRID:AB_2629482
(0.1 µg/µl)
Chemical
compound, drug
Protein kinase Cζ
pseudosubstrate,
myristoyl trifluoroacetate
salt
Sigma-Aldrich P1614
Chemical
compound, drug
1-Azakenpaullone Sigma-Aldrich A3734
Chemical
compound, drug
Biotinylated Dextran
Amine-Texas Red
Vector Laboratories SP-1140;
RRID:AB_2336249
Chemical
compound, drug
Dextran, Alexa Fluor
488; 10,000 MW, Anionic,
Fixable
Thermo Fisher Scientific D22910
Chemical
compound, drug
Dextran, Alexa Fluor
555; 10,000 MW, Anionic,
Fixable
Thermo Fisher Scientific D34679
Chemical
compound, drug
Dextran, Alexa Fluor
647; 10,000 MW, Anionic,
Fixable
Thermo Fisher Scientific D22914
Chemical
compound, drug
Dextran, Cascade Blue,
10,000 MW, Anionic, Lysine
Fixable
Thermo Fisher Scientific D1976
Deposited Data Nematostella vectensis
genome assembly 1.0
JGI https://genome.jgi.doe.gov/Nemve1/Nemve1.home.html
Biological sample Nematostella vectensis Whitney Laboratory for
Marine Bioscience, FL, USA.
RRID:SCR_005153
Sequence-based
reagent
Genomic PCR Nvpar-6 and
dnNvpar-6: F-AAAACCAC
CATCAGCCGAGTCA;
R-TATTGATAGAATACCAGTCTCA
NEMVEDRAFT
_v1g233358
Sequence-based
reagent
sgRNAs Nvpar-6:
1-GGATGTTGCCGACTCGCAGT;
2-GGAGAAGGCGAACTCGTCTG;
3-GGATAACCCTGTGCCAGTCA
CRISPRevolution sgRNA;
Synthego
NEMVEDRAFT
_v1g233358
Sequence-based
reagent
dnNvpar-3: F-ATGATGAAGGTTGTAGT;
R-TGCGCCCGATTCGAATCCATCT
NEMVEDRAFT
_v1g240248
Sequence-based
reagent
sgRNAs Nvpar-3:
1-GGGTGTTCGAGGGACGCGAT;
2- GGGCAGGTTTATCCCGAAGG;
3- ACCAACGAUCUAGAUCCAGU
CRISPRevolution sgRNA;
Synthego
NEMVEDRAFT
_v1g240248
Sequence-based
reagent
Genomic PCR Nvpar-3:
F-GTAGACGGGACTGGTTTGGA;
R-AGGGACAGGTTGCTCCTTTT
NEMVEDRAFT
_v1g240248
Sequence-based
reagent
dnNvpar-1:
F-AATATAAACTATGAACTTAACG;
R-TTAAAGTTTTAATTCATTTGCA
NEMVEDRAFT
_v1g 139527
Sequence-based
reagent
sgRNAs Nvsnail-A:
2-GGGGCCGGTAATGACGCGCG;
3-GGCGTAGAGTCACACCGCAA;
4-GGCGATGATATCGAGCTCGG;
5-GGGCATCTTGAGTGCACCCA
CRISPRevolution sgRNA;
Synthego
NEMVEDRAFT
_v1g240686
Sequence-based
reagent
sgRNAs Nvsnail-A:
1-GGGCTCTCTTGCTCCGTAAC;
6-GGGTTTCCTGGCGCTGGGAT
CRISPRevolution Modified
sgRNA; Synthego
NEMVEDRAFT
_v1g240686
Sequence-based
reagent
Genomic PCR Nvsnail-A (full length):
F-ATGCCCCGCTCGTTTCTAG;
R-TCCTTGTGACGGGCAGCC
NEMVEDRAFT
_v1g240686
Sequence-based
reagent
sgRNAs Nvsnail-B:
1-GGAAGAGGATGTGAGGTTTT;
2-GAGATGATATTAGGCTGGTG;
4-GAAAAGCTGTACGACTCCTT;
5-GGGCATCTTGAGAGCGCCCA
CRISPRevolution sgRNA;
Synthego
NEMVEDRAFT
_v1g236363
Sequence-based
reagent
sgRNAs Nvsnail-B:
3-GGGTGAAGACTAAGACAGAG;
6-GGGCGATGAATCGTGTTTAA
CRISPRevolution Modified
sgRNA; Synthego
NEMVEDRAFT
_v1g236363
Sequence-based
reagent
Genomic PCR Nvsnail-B (full length):
F-ATGCCGAGGTCCTTCCTGG;
R-GCAGAGATTTTGCCGACACAT
NEMVEDRAFT
_v1g236363
Recombinant
DNA reagent
pSPE3-mVenus Roure et al. (2007) Gateway vector
Recombinant
DNA reagent
pSPE3-mCherry Roure et al. (2007) Gateway vector
Recombinant
DNA reagent
pSPE3-Nvpar-6-mVenus Salinas-Saavedra et al. (2015)
Recombinant
DNA reagent
pSPE3-Nvpar-3-mVenus Salinas-Saavedra et al. (2015)
Recombinant
DNA reagent
Nvß-catenin expression
constructs
Wikramanayake et al. (2003);
Röttinger et al., 2012
Recombinant
DNA reagent
Nvsnail-A backbone to
generate expression
constructs
Magie et al. (2007)
Software,
algorithm
Fiji (ImageJ) NIH http://fiji.sc
Software,
algorithm
Imaris 7.6.4 Bitplane Inc.
Software,
algorithm
CRISPRscan Moreno-Mateos et al. (2015) http://www.crisprscan.org/
Software,
algorithm
SPSS IBM