Table 2.
Information of 22 pairs of specific indel primers used in this study
| Primer | Scaffold | Position | Forward primer | Reverse primer |
|---|---|---|---|---|
| In1270–1 | NW_008988270.1 (Scaffold 244.0) | 65,865 | AGAAAGGAGGAGGAGGAAG | AAATCCAAGCCCTATAAACC |
| In1270–2 | NW_008988270.1 (Scaffold 244.0) | 128,003 | AATAGGCCAGCATACCATAA | TAATGAACAATACCCATCCG |
| In1270–3 | NW_008988270.1 (Scaffold 244.0) | 160,055 | ATTGCTACAAAGCTGCTCTC | TATTTTGCCCTTACAGTTCG |
| In1270–4 | NW_008988270.1 (Scaffold 244.0) | 208,561 | TACCTACCGGTGTCTGATTC | ATTGTTTTGGTTTTGTTGCT |
| In1270–5 | NW_008988270.1 (Scaffold 244.0) | 257,130 | TTTTAAGGGGCAATTTATGA | AACCTCCAAAAACAAACAAA |
| In1270–6 | NW_008988270.1 (Scaffold 244.0) | 309,525 | AGAATTCAGAAATGGGGTTT | TAATCGACATTGACACGAAA |
| In1270–7 | NW_008988270.1 (Scaffold 244.0) | 352,640 | CGTGAGAGCTTACTCAGACC | CTAATGTTATTGAAGCGGGT |
| In1270–8 | NW_008988270.1 (Scaffold 244.0) | 403,691 | ATAGAACGGGTCTTTTTGGT | TTTCATAATTTGTGGGACATT |
| In1270–9 | NW_008988270.1 (Scaffold 244.0) | 457,893 | TCTAAGGGCTGGACAGAATA | TTAAGTAAGGAGTCGGCAAC |
| In1322–1 | NW_008988322.1 (Scaffold 297.0) | 125,085 | TTGAGGTTTCTTTTTGGTTG | TTGATATAAACCAGGGGATG |
| In1322–2 | NW_008988322.1 (Scaffold 297.0) | 150,815 | TTACTGACAGCATCTGACCA | CAACTGGATGATTTCCTCAT |
| In1322–3 | NW_008988322.1 (Scaffold 297.0) | 202,780 | GCCTTTCTGTTTGCTAGAAG | ATCTTCTACAACTTGCTGCC |
| In1322–4 | NW_008988322.1 (Scaffold 297.0) | 250,555 | TCTAAAAATGAAGCAGACCC | CTCTTTCGATTTTCTTGTGC |
| In1400–1 | NW_008988400.1 (Scaffold370.0) | 161,533 | CAAGGACCAAAGTCACGTAT | TCTTCGACTTTAGGAAAAGAGT |
| In1400–2 | NW_008988400.1 (Scaffold370.0) | 204,789 | GTATTTATGGACAAGCAGGC | TAACCACCCTGAGAATATGG |
| In1400–3 | NW_008988400.1 (Scaffold370.0) | 244,039 | AAAATCGTTCCTTTCATGG | GAGGTTAAGCCCACTCCTAT |
| In1400–4 | NW_008988400.1 (Scaffold370.0) | 305,894 | GAAATGAAAGAACGAAGGTG | TTTGACTTTTCTTCTGTGGG |
| In1400–5 | NW_008988400.1 (Scaffold370.0) | 344,900 | AAGAAAAAGGGGCTTTTAGA | AATCCATTCGGTACAGTCAG |
| In1579–1 | NW_008988579.1 (Scaffold545.0) | 23,081 | CATGTTACAGGTCCAACCTT | CCTATTGCAATCTGAAATCC |
| In1579–2 | NW_008988579.1 (Scaffold545.0) | 50,472 | GCCCTAATTAAATGTCCTCA | AGGTGAGATCACAAGTGGAC |
| In1579–3 | NW_008988579.1 (Scaffold545.0) | 100,223 | TTTCGACTCTTGCTTACCTC | ACGAAGTGCTTTTTACCAAA |
| In1579–4 | NW_008988579.1 (Scaffold545.0) | 152,991 | GGAGTCTGGCTCATGTAATC | ACTTGGGCTATAGGGACACT |