Table 5. Validation of target gene expression.
Predicted target genes were significantly anti-correlated in expression, compared to the microRNA having the highest prediction score. Expression values were measured for the target gene and microRNA in each tuber using qPCR.
Target gene | microRNA | R2 | P |
---|---|---|---|
GRIN2A | 200b-3p | 0.627 | <0.0001 |
GRIN2B | 142-5p | 0.725 | <0.0001 |
KCNB1 | 200b-3p | 0.602 | <0.0001 |
MEF2C | 223-3p | 0.476 | 0.0004 |
SCN2A | 142-5p | 0.583 | <0.0001 |
SLC12A5 | 32-5p | 0.619 | <0.0001 |
SYT1 | 142-5p | 0.789 | <0.0001 |
TSC1 | 200b-3p | 0.427 | 0.001 |