Table 1.
The detailed information of UBC family members in both P. bretschneideri and P. communis.
| Gene Name | Gene Identifier | Chromosme | 5′ End | 3′ End | Protein Size (aa) |
|---|---|---|---|---|---|
| PcpUBC01 | PCP011547.1 | chr2 | 908379 | 915288 | 378 |
| PcpUBC02 | PCP008190.1 | chr2 | 2303235 | 2304455 | 406 |
| PcpUBC03 | PCP026226.1 | chr2 | 9163625 | 9165622 | 161 |
| PcpUBC04 | PCP025062.1 | chr2 | 11398030 | 11400462 | 160 |
| PcpUBC05 | PCP029820.1 | chr2 | 11983749 | 11985588 | 154 |
| PcpUBC06.1 | PCP020092.1 | chr3 | 547762 | 556678 | 986 |
| PcpUBC06.2 | PCP041697.1 | chr3 | 551276 | 556678 | 387 |
| PcpUBC07 | PCP000885.1 | chr3 | 3236140 | 3247151 | 841 |
| PcpUBC08 | PCP013747.1 | chr3 | 4266095 | 4267481 | 148 |
| PcpUBC09 | PCP031109.1 | chr3 | 6092388 | 6096394 | 192 |
| PcpUBC10 | PCP029016.1 | chr3 | 9480497 | 9483572 | 146 |
| PcpUBC11 | PCP029037.1 | chr3 | 11156660 | 11161769 | 769 |
| PcpUBC12 | PCP008664.1 | chr3 | 16102272 | 16105426 | 277 |
| PcpUBC13.1 | PCP006596.1 | chr4 | 3944944 | 3952328 | 304 |
| PcpUBC13.2 | PCP033076.1 | chr4 | 3944944 | 3946278 | 148 |
| PcpUBC14 | PCP032557.1 | chr4 | 13065481 | 13065759 | 92 |
| PcpUBC15 | PCP004584.1 | chr5 | 4531710 | 4535205 | 920 |
| PcpUBC16 | PCP000343.1 | chr5 | 6602829 | 6603942 | 120 |
| PcpUBC17 | PCP000325.1 | chr5 | 6785831 | 6791593 | 1148 |
| PcpUBC18 | PCP013561.1 | chr6 | 7061585 | 7063890 | 183 |
| PcpUBC19.1 | PCP003994.1 | chr6 | 9051182 | 9054610 | 490 |
| PcpUBC19.2 | PCP038680.1 | chr6 | 9053326 | 9054610 | 152 |
| PcpUBC20 | PCP006677.1 | chr6 | 10001882 | 10012807 | 890 |
| PcpUBC21 | PCP025848.1 | chr7 | 1250213 | 1253437 | 172 |
| PcpUBC22 | PCP025852.1 | chr7 | 1277835 | 1279055 | 189 |
| PcpUBC23 | PCP027463.1 | chr7 | 2394123 | 2396438 | 148 |
| PcpUBC24 | PCP039252.1 | chr7 | 5395929 | 5399115 | 181 |
| PcpUBC25 | PCP041398.1 | chr7 | 9425098 | 9426267 | 78 |
| PcpUBC26 | PCP023269.1 | chr7 | 14434633 | 14435892 | 419 |
| PcpUBC27 | PCP018282.1 | chr8 | 526845 | 534958 | 439 |
| PcpUBC28 | PCP024977.1 | chr8 | 2320747 | 2321922 | 189 |
| PcpUBC29 | PCP014622.1 | chr8 | 5359408 | 5371794 | 989 |
| PcpUBC30 | PCP013024.1 | chr8 | 12182295 | 12185615 | 188 |
| PcpUBC31.1 | PCP025013.1 | chr9 | 5181126 | 5187890 | 423 |
| PcpUBC31.2 | PCP042586.1 | chr9 | 5181126 | 5183531 | 195 |
| PcpUBC32.1 | PCP029211.1 | chr9 | 5697502 | 5704326 | 356 |
| PcpUBC32.2 | PCP037499.1 | chr9 | 5697502 | 5700526 | 237 |
| PcpUBC33 | PCP022975.1 | chr10 | 4876099 | 4877045 | 137 |
| PcpUBC34 | PCP006043.1 | chr10 | 13347113 | 13347565 | 150 |
| PcpUBC35 | PCP019803.1 | chr10 | 17163601 | 17167148 | 921 |
| PcpUBC36 | PCP037747.1 | chr11 | 5179080 | 5182742 | 153 |
| PcpUBC37 | PCP003934.1 | chr11 | 5615653 | 5620782 | 686 |
| PcpUBC38 | PCP014945.1 | chr11 | 12048835 | 12052442 | 227 |
| PcpUBC39 | PCP007359.1 | chr11 | 13280818 | 13282231 | 148 |
| PcpUBC40 | PCP041407.1 | chr12 | 2420398 | 2421551 | 148 |
| PcpUBC41 | PCP043134.1 | chr12 | 15435377 | 15437609 | 146 |
| PcpUBC42 | PCP003304.1 | chr13 | 3769096 | 3771160 | 152 |
| PcpUBC43 | PCP028885.1 | chr13 | 7446155 | 7448170 | 373 |
| PcpUBC44 | PCP010847.1 | chr14 | 1973506 | 1975549 | 195 |
| PcpUBC45 | PCP000493.1 | chr14 | 3899314 | 3905194 | 754 |
| PcpUBC46 | PCP006717.1 | chr14 | 4144989 | 4159895 | 1373 |
| PcpUBC47 | PCP033096.1 | chr14 | 4155864 | 4157211 | 152 |
| PcpUBC48 | PCP017973.1 | chr14 | 6488805 | 6490257 | 144 |
| PcpUBC49 | PCP031605.1 | chr14 | 8511513 | 8512945 | 265 |
| PcpUBC50.1 | PCP001680.1 | chr14 | 12856983 | 12862739 | 444 |
| PcpUBC50.2 | PCP032125.1 | chr14 | 12860593 | 12862739 | 146 |
| PcpUBC51 | PCP022610.1 | chr15 | 2571489 | 2577399 | 467 |
| PcpUBC52 | PCP032902.1 | chr15 | 3995850 | 3996286 | 78 |
| PcpUBC53 | PCP013613.1 | chr15 | 5801442 | 5811234 | 828 |
| PcpUBC54 | PCP005846.1 | chr15 | 15546784 | 15549513 | 160 |
| PcpUBC55 | PCP020991.1 | chr15 | 18866853 | 18872463 | 319 |
| PcpUBC56 | PCP014540.1 | chr15 | 21362811 | 21364686 | 161 |
| PcpUBC57 | PCP006806.1 | chr16 | 1486195 | 1494553 | 341 |
| PcpUBC58 | PCP026158.1 | chr16 | 4290275 | 4292359 | 152 |
| PcpUBC59 | PCP021281.1 | chr16 | 5293770 | 5294891 | 373 |
| PcpUBC60 | PCP021299.1 | chr16 | 5419315 | 5421158 | 307 |
| PcpUBC61 | PCP010786.1 | chr17 | 6829215 | 6832764 | 267 |
| PcpUBC62 | PCP042470.1 | chr17 | 15393404 | 15402997 | 596 |
| PcpUBC63 | PCP012277.1 | chr17 | 17062013 | 17063062 | 349 |
| PcpUBC64 | PCP007143.1 | chr17 | 17728444 | 17733945 | 621 |
| PcpUBC65 | PCP018399.1 | scaffold00612 | 73468 | 83219 | 651 |
| PcpUBC66 | PCP021641.1 | scaffold00634 | 76924 | 79227 | 148 |
| PcpUBC67 | PCP007398.1 | scaffold00805 | 133398 | 134716 | 174 |
| PcpUBC68 | PCP018521.1 | scaffold00852 | 13601 | 20410 | 278 |
| PcpUBC69 | PCP004264.1 | scaffold00983 | 16646 | 19316 | 148 |
| PcpUBC70 | PCP021954.1 | scaffold01394 | 34467 | 36817 | 191 |
| PcpUBC71 | PCP007629.1 | scaffold01465 | 20581 | 22904 | 291 |
| PcpUBC72 | PCP002761.1 | scaffold01522 | 35381 | 36867 | 160 |
| PcpUBC73 | PCP020361.1 | scaffold01593 | 68663 | 70923 | 191 |
| PcpUBC74 | PCP045045.1 | scaffold01774 | 29298 | 33191 | 754 |
| PcpUBC75 | PCP001255.1 | scaffold01881 | 39525 | 44855 | 1147 |
| PcpUBC76 | PCP004531.1 | scaffold01923 | 15838 | 21766 | 337 |
| PcpUBC77 | PCP028469.1 | scaffold02358 | 32352 | 36077 | 463 |
| PcpUBC78 | PCP022164.1 | scaffold02454 | 7209 | 11865 | 389 |
| PcpUBC79 | PCP012568.1 | scaffold02548 | 27443 | 29342 | 178 |
| PcpUBC80 | PCP043259.1 | scaffold04878 | 3046 | 6910 | 134 |
| PcpUBC81 | PCP001444.1 | scaffold05041 | 9798 | 11719 | 183 |
| PcpUBC82 | PCP022346.1 | scaffold17014 | 829 | 2135 | 180 |
| PcpUBC83 | PCP040042.1 | scaffold23907 | 470 | 1254 | 125 |
| PcpUBC84 | PCP011188.1 | scaffold27287 | 92 | 1717 | 232 |
| PbrUBC01 | Pbr021045.1 | Chr1 | 3279060 | 3282148 | 149 |
| PbrUBC02 | Pbr022046.1 | Chr1 | 5355491 | 5357926 | 192 |
| PbrUBC03 | Pbr018716.1 | Chr1 | 9129424 | 9132884 | 149 |
| PbrUBC04 | Pbr013632.1 | Chr1 | 9364933 | 9367901 | 149 |
| PbrUBC05 | Pbr029889.2 | Chr2 | 11205065 | 11207039 | 195 |
| PbrUBC06 | Pbr025178.1 | Chr2 | 13123810 | 13126801 | 161 |
| PbrUBC07 | Pbr022865.1 | Chr2 | 15059120 | 15062337 | 184 |
| PbrUBC08 | Pbr022866.1 | Chr2 | 15070696 | 15073441 | 182 |
| PbrUBC09 | Pbr040498.1 | Chr2 | 15603251 | 15605586 | 162 |
| PbrUBC10 | Pbr024232.2 | Chr3 | 7098302 | 7101956 | 160 |
| PbrUBC11 | Pbr027637.1 | Chr3 | 9231735 | 9233562 | 181 |
| PbrUBC12 | Pbr023139.1 | Chr3 | 17780615 | 17782004 | 149 |
| PbrUBC13 | Pbr000740.1 | Chr3 | 19467052 | 19469759 | 170 |
| PbrUBC14 | Pbr013150.2 | Chr3 | 22108425 | 22111475 | 149 |
| PbrUBC15 | Pbr034016.1 | Chr3 | 25287937 | 25291916 | 168 |
| PbrUBC16 | Pbr030934.3 | Chr4 | 12531057 | 12533684 | 161 |
| PbrUBC17 | Pbr027417.1 | Chr5 | 12936909 | 12946872 | 201 |
| PbrUBC18 | Pbr027395.1 | Chr5 | 13135775 | 13142057 | 1149 |
| PbrUBC19 | Pbr000361.1 | Chr5 | 25903450 | 25906904 | 853 |
| PbrUBC20 | Pbr011471.1 | Chr6 | 1539205 | 1541448 | 153 |
| PbrUBC21 | Pbr009129.1 | Chr6 | 7334609 | 7336195 | 77 |
| PbrUBC22 | Pbr014124.1 | Chr6 | 9284322 | 9290606 | 296 |
| PbrUBC23 | Pbr018194.1 | Chr6 | 13523851 | 13526524 | 184 |
| PbrUBC24 | Pbr040529.1 | Chr6 | 16795923 | 16797553 | 181 |
| PbrUBC25 | Pbr032353.1 | Chr7 | 10867139 | 10869902 | 224 |
| PbrUBC26 | Pbr006183.1 | Chr8 | 15645575 | 15647047 | 190 |
| PbrUBC27 | Pbr004154.1 | Chr8 | 4690292 | 4691740 | 129 |
| PbrUBC28 | Pbr032653.1 | Chr9 | 4250106 | 4253822 | 461 |
| PbrUBC29 | Pbr032645.1 | Chr9 | 4153561 | 4154900 | 279 |
| PbrUBC30 | Pbr031810.1 | Chr10 | 268749 | 273571 | 458 |
| PbrUBC31 | Pbr016259.1 | Chr10 | 4489977 | 4494846 | 922 |
| PbrUBC32 | Pbr009080.1 | Chr10 | 10152737 | 10153189 | 151 |
| PbrUBC33 | Pbr009081.1 | Chr10 | 10158759 | 10159211 | 151 |
| PbrUBC34 | Pbr020740.1 | Chr10 | 17324391 | 17325467 | 149 |
| PbrUBC35 | Pbr020719.1 | Chr10 | 17573570 | 17574635 | 149 |
| PbrUBC36 | Pbr020703.1 | Chr10 | 17785964 | 17790523 | 891 |
| PbrUBC37 | Pbr038220.3 | Chr11 | 4285552 | 4289283 | 190 |
| PbrUBC38 | Pbr038323.1 | Chr11 | 5463176 | 5468616 | 589 |
| PbrUBC39 | Pbr017901.1 | Chr11 | 11843306 | 11844937 | 181 |
| PbrUBC40 | Pbr031559.1 | Chr11 | 13000377 | 13002724 | 149 |
| PbrUBC41 | Pbr041320.1 | Chr11 | 21287679 | 21289091 | 152 |
| PbrUBC42 | Pbr017298.1 | Chr11 | 24728725 | 24731067 | 149 |
| PbrUBC43 | Pbr028474.1 | Chr12 | 194166 | 195789 | 149 |
| PbrUBC44 | Pbr016440.1 | Chr12 | 3192332 | 3192601 | 90 |
| PbrUBC45 | Pbr039044.1 | Chr12 | 10209302 | 10211625 | 309 |
| PbrUBC46 | Pbr015391.1 | Chr12 | 19750784 | 19753479 | 147 |
| PbrUBC47 | Pbr010810.1 | Chr13 | 289004 | 291284 | 149 |
| PbrUBC48 | Pbr011958.2 | Chr13 | 9713060 | 9715379 | 231 |
| PbrUBC49 | Pbr010372.1 | Chr14 | 2425473 | 2427613 | 147 |
| PbrUBC50 | Pbr010424.1 | Chr14 | 2933078 | 2935217 | 147 |
| PbrUBC51 | Pbr038166.1 | Chr14 | 7236972 | 7240490 | 273 |
| PbrUBC52 | Pbr026720.1 | Chr14 | 8739052 | 8742374 | 169 |
| PbrUBC53 | Pbr027115.1 | Chr14 | 12937009 | 12939516 | 196 |
| PbrUBC54 | Pbr005908.1 | Chr15 | 2962026 | 2964448 | 162 |
| PbrUBC55 | Pbr009224.1 | Chr15 | 4281248 | 4283960 | 158 |
| PbrUBC56 | Pbr019673.1 | Chr15 | 7696112 | 7697156 | 100 |
| PbrUBC57 | Pbr016945.1 | Chr15 | 14705287 | 14708021 | 524 |
| PbrUBC58 | Pbr017248.1 | Chr15 | 19933740 | 19935641 | 141 |
| PbrUBC59 | Pbr017249.1 | Chr15 | 19937558 | 19939328 | 182 |
| PbrUBC60 | Pbr015294.2 | Chr15 | 23696990 | 23705032 | 371 |
| PbrUBC61 | Pbr024308.1 | Chr15 | 24667752 | 24669854 | 153 |
| PbrUBC62 | Pbr024286.1 | Chr15 | 24961413 | 24963994 | 190 |
| PbrUBC63 | Pbr024279.1 | Chr15 | 25164896 | 25167005 | 178 |
| PbrUBC64 | Pbr017425.1 | Chr15 | 26387149 | 26392677 | 702 |
| PbrUBC65 | Pbr040652.1 | Chr15 | 36951735 | 36952300 | 112 |
| PbrUBC66 | Pbr020836.2 | Chr15 | 42195161 | 42198738 | 228 |
| PbrUBC67 | Pbr012108.1 | Chr16 | 3304638 | 3306350 | 202 |
| PbrUBC68 | Pbr013690.1 | Chr16 | 9644295 | 9646021 | 188 |
| PbrUBC69 | Pbr022472.1 | Chr17 | 2772442 | 2779627 | 468 |
| PbrUBC70 | Pbr026816.1 | Chr17 | 3678331 | 3681687 | 454 |
| PbrUBC71 | Pbr034051.1 | Chr17 | 5335721 | 5339074 | 454 |
| PbrUBC72 | Pbr008641.1 | Chr17 | 6164722 | 6165771 | 350 |
| PbrUBC73 | Pbr040232.1 | Chr17 | 20655869 | 20656618 | 106 |
| PbrUBC74 | Pbr003941.1 | scaffold1182.0 | 19987 | 21731 | 175 |
| PbrUBC75 | Pbr005003.1 | scaffold1241.0 | 889 | 1709 | 133 |
| PbrUBC76 | Pbr005004.1 | scaffold1241.0 | 11548 | 13331 | 182 |
| PbrUBC77 | Pbr006049.1 | scaffold1301.0 | 22029 | 24744 | 149 |
| PbrUBC78 | Pbr009005.1 | scaffold1564.0 | 5159 | 7986 | 149 |
| PbrUBC79 | Pbr028213.1 | scaffold467.0 | 324186 | 326069 | 190 |
| PbrUBC80 | Pbr028219.1 | scaffold467.0 | 348935 | 352574 | 172 |
| PbrUBC81 | Pbr032413.2 | scaffold581.0.1 | 30262 | 34773 | 126 |
| PbrUBC82 | Pbr034367.1 | scaffold640.0 | 26565 | 30347 | 154 |
| PbrUBC83 | Pbr042566.1 | scaffold992.0 | 77372 | 83394 | 147 |
Note: Red logo represents tandem duplication.