Table 1.
Demographic and exposure characteristics of the study groups from NIEHS Clinical Research Unit and Multi-Ethnic Study of Atherosclerosis summarized by analysis group. Additional detail on the relationships between these analysis groups is available in Excel Table S1.
Characteristic | CRU-RRBS | MESA-RRBS | CRU-RRBS- 5 Celltypes | CRU-Pyro | CRU-BSAS | CRU-Genotyping | CRU-BSAS Saliva | mRNA | CRU-eRNAa | CRU-Deep RNA seq | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Smoker () | Non smoker () | Smoker () | Non smoker () | Smoker () | Non smoker () | Smoker () | Non smoker () | Smoker () | Non smoker () | Smoker () | Non smoker () | Smoker () | Non smoker () | Smoker () | Non smoker () | Smoker () | Non smoker () | Smoker () | Non smoker () | |
Age, y [mean (SD), range] |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Sex (% women) | 61 | 60 | 54 | 56 | 100 | 100 | 69 | 69 | 66 | 70 | 68 | 67 | 78 | 71 | 72 | 74 | 56 | 60 | 67 | 67 |
Black (n) | 9 | 9 | 6 | 6 | 5 | 5 | 27 | 23 | 24 | 17 | 24 | 21 | 18 | 19 | 15 | 17 | 8 | 7 | 1 | 1 |
White (n) | 8 | 11 | 17 | 16 | 4 | 5 | 19 | 22 | 18 | 14 | 14 | 22 | 17 | 16 | 13 | 14 | 7 | 8 | 2 | 2 |
Other (n) | 1b | — | 5c | 5c | — | — | 2b | — | 2b | — | 2b | — | 2b | — | 1b | — | 1b | — | — | — |
Cotininec, ng/mL serum [mean (SD)] | 249 (106) | 2 (0) | — | — | 217 (102) | 2 (0) | 231 (138) | 2 (1) | 230 (143) | 2 (0) | 224 (120) | 2 (0) | 221 (146) | 2 (2) | 263 (150) | 2 (2) | 245 (156) | 2 (0) | 314 (140) | 2 (0) |
Cotinined, ng/mL urine [mean (SD)] | — | — | 5,367 (5,757) | 7 (0) | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — |
Cigarettes per day [mean (SD)] | 19 (9) | — | 34 (25) | — | 22 (11) | — | 16 (9) | — | 16 (9) | — | 16 (9) | — | 15 (9) | — | 18 (8) | — | 17 (5) | — | 11 (5) | — |
Pack-years [mean (SD)] | 27 (20) | — | 11 (7) | — | 34 (24) | — | 21 (19) | — | 21 (19) | — | 23 (18) | — | 19 (18) | — | 24 (17) | — | 22 (12) | — | 14 (12) | — |
Note: —, not applicable; BSAS, bisulfite amplicon sequencing; CRU, clinical research unit; DNaseI, DNase I hypersensitivity region; eRNA, enhancer noncoding RNA; MESA, Multi-Ethnic Study of Atherosclerosis; NIEHS, National Institute of Environmental Health Sciences; RRBS, reduced representation bisulfite sequencing.
eRNA subjects are aggregated, specific assays and analyses are noted in Excel Table S1.
CRU Other: American Indian/Alaska Native.
MESA Other: Hispanic.
CRU Cotinine measured in serum.
MESA Cotinine measured in urine.