Data collection and processing |
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Camera |
Gatan K2 |
Gatan K2 |
Gatan K2 |
Gatan K2 |
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Voltage (kV) |
300 |
300 |
300 |
300 |
Electron exposure (e–/Å2) |
59.6 |
59.6 |
59.6 |
59.6 |
Defocus range (µm) |
1.3-3.5 |
1.3-3.5 |
1.3-3.5 |
1.3-3.5 |
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Pixel size (Å) |
1.06 |
1.06 |
1.06 |
1.06 |
Symmetry imposed |
Cl |
Cl |
Cl |
Cl |
Initial particle images (no.) |
251692 |
251692 |
251692 |
251692 |
Final particle images (no.) |
144278 |
33937 |
16287 |
17263 |
Map resolution (Å) |
3.75 |
4.34 |
4.68 |
4.62 |
0.143 FSC threshold |
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Map sharpening B-factor (Å2) |
-142 |
-114 |
-124 |
-136 |
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Refinement |
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Initial model used (PDB code) |
models for refinement were build de novo or based on 4WW4 (Rvbl/2) and lNWK (actin) |
models for refinement were build on 6FHS (INO80core) and 4r8p (nucleosome) |
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Model resolution (Å) |
3.82 |
4.47 |
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0.5 FSC threshold |
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Model resolution range (Å) |
360.4 - 3.7 |
360.4 – 4.3 |
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Map sharpening B factor (Å2) |
-142 |
-114 |
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Model composition |
Non-hydrogen atoms |
27184 |
43462 |
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Protein and DNA residues |
3481 |
5114 |
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Ligands |
7 |
7 |
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B factors (Å2) |
Protein and DNA |
59.6 |
112.9 |
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Ligand |
54.3 |
80.29 |
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R.m.s. deviations |
Bond lengths (Å) |
0.008 |
0.010 |
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Bond angles (°) |
0.93 |
1.203 |
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Validation |
MolProbity score |
1.7 |
1.68 |
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Clashscore |
4.8 |
4.75 |
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Poor rotamers (%) |
0.1 |
0.13 |
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Ramachandran plot |
Favored (%) |
92.8 |
93.3 |
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Allowed (%) |
7.2 |
6.6 |
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Disallowed (%) |
0.0 |
0.1 |
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