Table II.
The 150 common DEGs in the GSE11969 dataset.
| A, Downregulated DEGs | ||
|---|---|---|
| Gene symbol | Log fold-change | Adjusted P-value |
| TGFBR2 | −1.19 | 3.30×10−4 |
| CFTR | −1.16 | 1.03×10−3 |
| CXCL1 | −1.14 | 5.16×10−4 |
| TGM2 | −1.11 | 4.73×10−5 |
| THBD | −1.11 | 4.73×10−5 |
| EPAS1 | −1.10 | 4.13×10−4 |
| AQP3 | −1.10 | 1.00×10−5 |
| CD9 | −1.07 | 3.03×10−3 |
| ALDH1A1 | −1.03 | 4.22×10−3 |
| RRAD | −1.01 | 1.52×10−4 |
| NEDD9 | −0.99 | 3.32×10−4 |
| CX3CL1 | −0.98 | 6.32×10−5 |
| ANXA1 | −0.97 | 4.15×10−4 |
| CNN2 | −0.95 | 3.65×10−4 |
| SLC16A5 | −0.95 | 1.53×10−4 |
| LAMB3 | −0.94 | 2.82×10−4 |
| PROS1 | −0.93 | 1.49×10−3 |
| FBLN1 | −0.92 | 8.81×10−4 |
| SP110 | −0.89 | 1.36×10−2 |
| TGFBR3 | −0.88 | 7.00×10−5 |
| RNASE4 | −0.87 | 1.76×10−4 |
| DMBT1 | −0.86 | 6.02×10−3 |
| CSTA | −0.85 | 5.07×10−3 |
| GPX3 | −0.85 | 1.10×10−3 |
| CTSH | −0.85 | 3.15×10−3 |
| PTGER4 | −0.85 | 3.15×10−3 |
| VAV1 | −0.84 | 8.80×10−3 |
| TCF21 | −0.83 | 4.99×10−4 |
| F13A1 | −0.83 | 1.22×10−3 |
| TACSTD2 | −0.83 | 5.82×10−4 |
| CST3 | −0.83 | 2.69×10−2 |
| STAT6 | −0.83 | 1.02×10−2 |
| ADH1B | −0.81 | 3.64×10−3 |
| ZFP36L2 | −0.81 | 6.86×10−4 |
| PZP | −0.81 | 5.75×10−3 |
| C3 | −0.80 | 2.70×10−2 |
| CLU | −0.76 | 4.60×10−2 |
| CYP4B1 | −0.75 | 3.74×10−3 |
| SCGB1A1 | −0.75 | 5.88×10−3 |
| FLRT3 | −0.74 | 3.15×10−2 |
| PCSK5 | −0.74 | 2.91×10−3 |
| CFH | −0.72 | 2.45×10−2 |
| LYN | −0.72 | 1.19×10−2 |
| ADRB2 | −0.71 | 6.46×10−5 |
| HLA-E | −0.71 | 9.33×10−3 |
| CAPN2 | −0.70 | 8.30×10−3 |
| BAG3 | −0.69 | 1.44×10−3 |
| TLR2 | −0.69 | 1.15×10−3 |
| FBLN5 | −0.69 | 3.74×10−4 |
| A2M | −0.66 | 2.23×10−2 |
| C6 | −0.66 | 1.32×10−4 |
| FOLR1 | −0.65 | 9.53×10−4 |
| PLK2 | −0.65 | 1.92×10−4 |
| HNMT | −0.63 | 1.23×10−2 |
| MYO5C | −0.61 | 1.28×10−2 |
| CAST | −0.61 | 1.05×10−2 |
| PTGDS | −0.61 | 4.53×10−3 |
| ANXA11 | −0.59 | 2.59×10−2 |
| CCND1 | −0.58 | 3.88×10−5 |
| EPHA2 | −0.58 | 3.88×10−5 |
| SERPINA1 | −0.58 | 5.84×10−4 |
| PRNP | −0.57 | 4.65×10−2 |
| VAMP8 | −0.56 | 5.03×10−3 |
| ADH1C | −0.54 | 1.74×10−3 |
| CD81 | −0.52 | 3.13×10−3 |
| IL4R | −0.51 | 3.98×10−4 |
| B, Upregulated DEGs | ||
| Gene symbol | Log fold-change | Adjusted P-value |
| CCNB2 | 0.50 | 1.59×10−4 |
| DDC | 0.50 | 1.59×10−4 |
| HPRT1 | 0.50 | 1.59×10−4 |
| CDC20 | 0.50 | 3.39×10−4 |
| PARP1 | 0.51 | 3.92×10−3 |
| FANCG | 0.51 | 3.74×10−4 |
| PSIP1 | 0.51 | 3.74×10−4 |
| ENC1 | 0.51 | 4.43×10−2 |
| DEK | 0.52 | 2.91×10−3 |
| FZD3 | 0.52 | 6.44×10−3 |
| ZWINT | 0.52 | 2.34×10−4 |
| UNG | 0.52 | 3.02×10−4 |
| CDC7 | 0.53 | 3.98×10−5 |
| MCM3 | 0.53 | 8.82×10−3 |
| CHEK1 | 0.53 | 5.88×10−3 |
| NRTN | 0.53 | 1.43×10−3 |
| RBP1 | 0.53 | 5.99×10−4 |
| MSH6 | 0.53 | 2.16×10−4 |
| DTYMK | 0.54 | 6.60×10−5 |
| MCM2 | 0.55 | 4.74×10−4 |
| CHGB | 0.56 | 3.30×10−4 |
| EXO1 | 0.56 | 3.30×10−4 |
| CELSR3 | 0.56 | 8.00×10−4 |
| CDKN3 | 0.56 | 7.01×10−3 |
| SHMT2 | 0.56 | 1.85×10−4 |
| TRIM36 | 0.56 | 1.58×10−3 |
| BUB1 | 0.56 | 1.23×10−3 |
| CDC6 | 0.56 | 4.94×10−5 |
| USP1 | 0.57 | 5.25×10−4 |
| PXMP2 | 0.57 | 3.87×10−5 |
| RACGAP1 | 0.57 | 3.87×10−5 |
| FKBP3 | 0.57 | 1.01×10−3 |
| MAD2L1 | 0.57 | 1.01×10−3 |
| DLK1 | 0.58 | 1.17×10−2 |
| HDAC2 | 0.58 | 9.39×10−5 |
| ASCL1 | 0.60 | 3.29×10−3 |
| SOX4 | 0.60 | 1.89×10−2 |
| COCH | 0.60 | 4.20×10−4 |
| PRDX2 | 0.61 | 7.76×10−5 |
| FANCA | 0.62 | 4.21×10−4 |
| RFC5 | 0.62 | 1.00×10−5 |
| ITGB3BP | 0.63 | 1.14×10−3 |
| LHX2 | 0.64 | 8.68×10−4 |
| MCM6 | 0.64 | 5.32×10−5 |
| CKS2 | 0.65 | 1.92×10−3 |
| CCNE2 | 0.66 | 2.14×10−4 |
| ASNS | 0.68 | 5.25×10−5 |
| CKS1B | 0.69 | 1.55×10−3 |
| FBXO5 | 0.69 | 9.25×10−5 |
| KCNH2 | 0.71 | 2.95×10−3 |
| TPD52 | 0.75 | 1.99×10−4 |
| STMN1 | 0.75 | 2.13×10−5 |
| TYMS | 0.75 | 2.13×10−5 |
| RRM2 | 0.76 | 6.99×10−5 |
| CBX5 | 0.76 | 2.44×10−3 |
| KIF11 | 0.76 | 1.09×10−3 |
| SOX11 | 0.77 | 1.42×10−2 |
| RECQL4 | 0.79 | 3.77×10−4 |
| PCNA | 0.79 | 4.39×10−4 |
| GMNN | 0.80 | 1.27×10−5 |
| MYBL2 | 0.81 | 7.84×10−4 |
| TTK | 0.83 | 5.23×10−5 |
| TOP2A | 0.84 | 1.95×10−4 |
| EZH2 | 0.85 | 7.70×10−6 |
| PAFAH1B3 | 0.85 | 7.70×10−6 |
| RAD54L | 0.85 | 7.70×10−6 |
| TIMELESS | 0.85 | 2.82×10−5 |
| GNG4 | 0.87 | 1.04×10−5 |
| SPAG5 | 0.87 | 1.04×10−5 |
| PTTG1 | 0.88 | 3.01×10−5 |
| NELL1 | 0.92 | 3.40×10−3 |
| MEST | 0.93 | 1.25×10−3 |
| NOL4 | 0.93 | 2.14×10−3 |
| UCHL1 | 0.94 | 3.18×10−3 |
| INSM1 | 0.97 | 2.25×10−4 |
| MKI67 | 0.98 | 1.13×10−3 |
| PCSK1 | 0.98 | 1.20×10−2 |
| BIRC5 | 1.00 | 3.28×10−5 |
| RFC4 | 1.01 | 9.53×10−6 |
| NEK2 | 1.01 | 9.94×10−4 |
| CENPF | 1.08 | 1.84×10−4 |
| CAMK2B | 1.10 | 1.89×10−4 |
| ISL1 | 1.30 | 7.31×10−3 |
| GRP | 1.32 | 1.16×10−2 |
DEG, differentially expressed genes.