Table 2. The designed novel nanoparticle was used for molecular docking studies and best docking scores of the ligands A and B are presented.
PDB | Ligand | XP GScore | Glide evdw | Glide ecoul | Glide energy |
1MBT | A | –6.002 | –45.282 | –7.838 | –53.121 |
B | –6.914 | –37.405 | –3.811 | –41.216 | |
2XCT | A | –7.243 | –80.123 | –2.432 | –65.990 |
B | –4.499 | –34.541 | –1.489 | –33.051 | |
1Y6A | A | –8.670 | –21.908 | –7.925 | –29.833 |
B | –4.613 | –32.925 | –4.923 | –37.848 | |
2ITY | A | –8.142 | –38.879 | –14.404 | –53.283 |
B | –6.277 | –38.072 | –10.062 | –48.134 | |
2YBF | A | –4.422 | –28.954 | –6.352 | –35.303 |
B | –3.101 | –25.343 | –2.241 | –27.585 |