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. 2018 Jul 31;6:e5355. doi: 10.7717/peerj.5355

Table 5. Alpha diversity results of gut microbiota of seabream fed two tested diets.

Number of reads per sample assigned to OTUs, and alpha diversity metrics values (normalized at the lowest sample size: 20,052 reads) of gut microbial community of gilthead sea bream fed CTRL (n = 4) or Sh108 (n = 6) diets for 90 days. Data are expressed as means ± SD. Different letters indicate statistically significant differences between groups (Student’s t-test, P < 0.05).

Diet Reads Observed species Good’s coverage PD Whole tree Chao1 Shannon
CTRL 26,828 ± 7,248b 160 ± 19 0.99 ± 0.0 13.8 ± 1.0 172 ± 19 3.3 ± 0.7
Sh108 47,883 ± 9,482a 154 ± 24 0.99 ± 0.0 13.6 ± 1.9 172 ± 21 2.4 ± 0.7
Total number of reads taxonomically classified 394,611
Mean number of reads/sample 39,461 ± 13,626
Total number of OTUs 259