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. 2018 Jul 26;10(7):1758–1775. doi: 10.18632/aging.101508

Table 1. DNA methylation data. The rows correspond to Illumina DNA methylation data sets.

No. Data Source Use n Source Median Age (Range)
1 existing, Portales-Casamar 2016, GSE80261 Train 216 Buccal 11 (5,18)
2 existing, Berko 2014, GSE50759 Train 96 Buccal 7 (1,28)
3 novel, blood methylation Train 278 whole blood 69 (2,92)
4 existing, Yang 2017, GSE104471 Train 72 Epithelium 30 (24,74)
5 existing, Ivanov 2016, GSE77136 Train 21 Fibroblast 33 (0.1,85)
6 existing, Wagner 2014, GSE52026 Train 10 Fibroblast 37 (23,63)
7 novel fibroblasts Train 48 Fibroblast 50 (0.42,94)
8 novel, Cell Applications Train 11 Fibroblast 56 (7,94)
9 existing, Borman 2016, SkinE-MTAB-4385 Train 108 Skin 49.25 (18,78)
10 existing, cord blood, GSE79056 Train 36 cord blood 0 (-0.28,0.04)
11 existing, Jessen 2016, GSE94876 Test 120 Buccal 46 (35,60)
12 Lussier 2018, GSE109042 Test 53 Buccal 10 (3.5,18)
13 existing, Vandiver 2015, GSE51954 Test 78 Dermis+Epidermis 65 (20,92)
14 novel, Kenneth Raj Test 23 Endothelial 19 (19,19)
15 novel, Kenneth Raj Test 44 Endothelial 19 (17,26)
16 novel, Kenneth Raj Test 48 Fibroblast 0 (0,0)
17 novel, Kenneth Raj Test 48 Fibroblast 0 (0,0)
18 novel, Progeria Research Foundation+ vendors Test 88 Fibroblast 8 (0,77)
19 novel, Junko Oshima Test 11 Fibroblast 36 (0,62)
20 novel, Kenneth Raj Test 43 Keratinocyte 0 (0,0)
21 novel, Blood methylation Inf 450 Test 100 Whole Blood 53 (19,82)
22 novel, Lymphoblastoid cell Test 100 Lymphoblast 53 (19,82)
23 novel, Saliva methylation Test 120 Saliva 44 (18, 81)
24 existing, Horvath 2015, GSE111223 Test 229 Saliva 68 (36,88)
25 existing, cord blood, GSE62924 Test 38 cord blood 0 (-.10,0.04)
26 existing, cord blood, GSE80283 Test 183 cord blood -0.22(-0.3,-0.1)

The table reports the data set number, relevant citation (first author and publication year), public availability (for example, Gene Expression Omnibus identifier), sample size (n), source of the DNA (for example, tissue), median age, age range (minimum and maximum age). The column ‘Use’ reports whether the data set was used as a training set or test set.