Table 6. Occurrence of conserved motifs for known positive and negative AOX regulators in the promoters of the TaAOX gene family.
Locus | TaAOX1a-2AL | TaAOX1a-2BL | TaAOX1a-2DL | TaAOX1a-like-2DL | regTaAOX-4BL | put.regTaAOX-3B | TaAOX1c-6AL | TaAOX1c-6BL | TaAOX1c-6DL | regTaAOX-3B | put.TaAOX1e-3DS | TaAOX1d-2AL.1 | TaAOX1d-2AL.2 | TaAOX1d-2DL | put.TaAOX1d-like-4AS |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
At1g32870 | 3 | 2 | 3 | 1 | 1 | 1 | |||||||||
At1g34190 | 2 | 2 | 2 | 1 | 1 | 1 | |||||||||
At1g66600 | 1 | 3 | 1 | ||||||||||||
At3g10500 | 2 | 2 | 2 | 1 | 1 | 1 | |||||||||
At5g04410 | 1 | 2 | 1 | 1 | 1 | ||||||||||
At1g80840* | 1 | ||||||||||||||
At2g40220* | 4 | 2 | 4 | 6 | 8 | 10 | 1 | 1 | 6 | 2 | 2 | 4 | 2 | ||
CTTGNNNNNCAMG | 2 | 2 | 2 | 2 | 2 | 2 | |||||||||
YTTGNNNNNVAMV | 8 | 5 | 6 | 4 | 2 | 3 | 4 | 1 | 1 | 1 | 4 | 3 |
The promoter for put.regTaAOX-6BL was not analyzed due to the majority of the promoter sequence being unresolved.
*Denotes negative regulators.