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. 2018 Aug 3;8:11689. doi: 10.1038/s41598-018-30064-x

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Interaction network of differentially expressed proteins. For both conditions, in vitro (A) and in planta (B) an interaction network was developed containing all proteins shared by both strains in this condition. Colored nodes represent query proteins and first shell of interactions. Empty nodes indicate proteins of unknown 3D structure. Different line colors indicate the types of protein-protein associations: light blue (from curated databases) and purple (experimentally determined) indicate known interactions. Green (gene neighborhood), red (gene fusions), blue (gene co-occurrence), light green (text mining), black (co-expression) and light purple (protein homology) indicate predicted interactions.