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. 2016 Mar 27;23(4):701–710. doi: 10.1093/jamia/ocw015

Figure 1:

Figure 1:

A snippet of the JSON FHIR code for a patient with lung cancer and a p.T790M mutation detected in the epidermal growth factor receptor gene. Three extensions to the FHIR Observation Resource are shown: (1) assessed.gene, which uses the NCI Thesaurus to represent the gene name in HGNC-compliant format; (2) assessed.referenceSeq, which uses the CCDS database to represent the gene reference sequence; (3) assessed.variant, which represents the observed gene mutation (c.2369C>T) and predicted protein alteration (p.T790M) directly in Human Genome Variant Society syntax. The full code for this patient is available in Supplementary Table 2.