Table 3. Nature and density of RNA edited sites in the organellar genomes of Leiosporoceros and other hornworts.
Plastome | Mitogenome | ||||||||
---|---|---|---|---|---|---|---|---|---|
Genome location | Editing event | L. dussii | A. angustus | L. dussii | N. aenigmaticus | ||||
% | % | % | % | ||||||
Total | 109 | 939 | 108 | 422 | |||||
C→ U | 109 | 100 | 507 | 54.0 | 88 | 82.2 | 361 | 82,9 | |
U→ C | 0 | 0 | 432 | 46.0 | 20 | 17,7 | 61 | 17,1 | |
Protein-coding genes | 102 | 94 | |||||||
1st codon position | 5 | 4.9 | 371 | 39.8 | 29 | 30.1 | 124 | - | |
2nd position | 96 | 94.11 | 532 | 57.1 | 57 | 61.2 | 247 | - | |
3rd position | 1 | 0.99 | 28 | 3.0 | 8 | 8.62 | 21 | - | |
Start codon created | 1 | 5 | 2.9 | 2 | 2,1 | - | - | ||
Stop codon created | 1 | 0 | 0 | 0 | 0 | - | - | ||
Stop removed | 0 | 0 | 164 | 97.0 | 9 | - | - | - | |
tRNA and rRNA genes | 0 | 1 | 1 | - | - | ||||
tRNA | 0 | 0 | 1 | 1 | 1 | 0.92 | - | - | |
rRNA | 0 | 0 | 0 | 0 | 0 | 0 | - | - | |
Non-coding regions | 7 | ||||||||
Intron | 2 | 1.90 | 3 | 37.5 | 2 | 1.85 | - | - | |
UTRs | 5 | 7.61 | 4 | 50.0 | 10 | 9.25 | - | - |