REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
APC-CD34 | BD Biosciences | Cat#345804 RRID: AB_2686894 |
PE-CD45 | BD Biosciences | Cat#555483 RRID: AB_395875 |
PE-CD43 | BD Biosciences | Cat#560199 RRID:AB_1645655 |
APC-CD56 | BD Biosciences | Cat#555518 RRID: AB_398601 |
PE-CD117 | BD Biosciences | Cat#340529 RRID: AB_400044 |
PE-CD3 | BD Biosciences | Cat#552127 RRID: AB_394342 |
PE-CD94 | BD Biosciences | Cat#555889 RRID: AB_396201 |
PE-NKG2D | BD Biosciences | Cat#561815 RRID: AB_10896282 |
PE-NKp46 | BD Biosciences | Cat#557991 RRID: AB_396974 |
PE-NKp44 | BD Biosciences | Cat#558563 RRID: AB_647239 |
PE-TRAIL | BD Biosciences | Cat#565499 RRID: N/A |
PE-FAS ligand | BD Biosciences | Cat#564261 RRID:N/A |
PE-CD16 | BD Biosciences | Cat#555407 RRID: AB_395807 |
APC-anti-human MSLN | R&D Systems | Cat#FAB32652A RRID: AB_2298058 |
PE-NKG2A | R&D Systems | Cat#FAB1059P RRID: AB_2132978 |
PE-goat-anti-mouse IgG F(ab)2- | Affymetrix eBioscience Inc. | Cat#15208759 RRID:N/A |
APC-CD107a | Affymetrix eBioscience Inc. | Cat#14-1079-80 RRID: AB_467426 |
PacBlue-IFN-γ | Biolegend | Cat#502522 RRID: AB_893525 |
PacBlue-CD45 | Biolegend | Cat#103126 RRID: AB_493535 |
Rabbit monoclonal anti-Fyn [EPR5500] | abcam | Cat#ab125016 RRID: AB_10972030 |
Rabbit monoclonal anti-Fyn (phospho Y530) + Yes (phospho Y537) | abcam | Cat# b188319 RRID:N/A |
Rabbit polyclonal anti-PLCγ2 | cell signaling technology | Cat#3872 RRID: AB_2299586 |
Rabbit polyclonal anti-phospho-PLCγ2 (Tyr1217) | cell signaling technology | Cat#3871 RRID: AB_2299548 |
Mouse monoclonal anti-PLCγ1 [M156] | abcam | Cat#ab41433 RRID: AB_777246 |
Rabbit monoclonal anti-phospho-PLCγ1 (Ser1248) | cell signaling technology | Cat#8713 RRID: AB_10890863 |
Rabbit monoclonal anti-Syk | cell signaling technology | Cat#2712 RRID: AB_10828107 |
Rabbit monoclonal anti-phospho-Syk (Tyr525/526) | cell signaling technology | Cat#2710 RRID: AB_2197222 |
Rabbit polyclonal anti- VAV1 | abcam | Cat#ab97574 RRID: AB_10680940 |
Rabbit monoclonal anti-phospho-VAV1 (Y174) | abcam | Cat#ab76225 RRID: AB_1524546 |
Mouse monoclonal anti-p44/42 MAPK (Erk1/2) (3A7) | cell signaling technology | Cat#9107 RRID: AB_10695739 |
Rabbit polyclonal anti-phospho-p44/42 MAPK (Erk1/2) (Thr202/Tyr204) | cell signaling technology | Cat#9101 RRID: AB_331646 |
Rabbit polyclonal-anti-IKKβ | cell signaling technology | Cat#2684 RRID: AB_10699025 |
Rabbit monoclonal anti-phospho-IKKα/β (Ser176/180) | cell signaling technology | Cat#2697 RRID: AB_2079382 |
Rabbit monoclonal anti-IκBα | cell signaling technology | Cat#9242 RRID: AB_823540 |
Mouse monoclonal anti-phospho-IκBα (Ser32/36) (5A5) | cell signaling technology | Cat#9246 RRID: AB_2267145 |
Goat polyclonal-anti-NKG2D, | abcam | Cat#ab36136 RRID: AB_776794 |
Rabbit monoclonal anti-CD3zeta | abcam | Cat#ab40804 RRID: AB_726343 |
Mouse monoclonal anti-DAP10 (H-3) | santa cruz biotechnology | Cat#sc-374196 RRID: AB_10987875 |
Mouse monoclonal anti-GAPDH | abcam | Cat#ab8245 RRID: AB_2107448 |
Rabbit monoclonal anti-NCAM | abcam | Cat#ab215981 RRID:N/A |
Mouse monoclonal anti-pan Cytokeratin | abcam | Cat#ab6401 RRID: AB_305450 |
Rabbit polyclonal anti-CD45 | abcam | Cat#ab10559 RRID: AB_442811 |
Bacterial and Virus Strains Cat# | ||
pKT2-mCAG-IRES-GFPZEO | Branden Moriarity lab | N/A |
PiggyBac-mCAG-IRES-GFPZEO | Branden Moriarity lab | N/A |
pCMV(CAT)T7-SB100 | Addgene | Cat#34879 |
Super piggyBac Transposase expression vector | System Biosciences Inc. | Cat#PB210PA-1 |
pCDH-CMV-MCS-EF1α-GreenPuro | System biosciences Inc. | Cat#CD513B-1 |
Biological Samples | ||
Human Serum AB | Sigma-Aldrich | Cat#H4522 |
Peripheral blood buffy coat | San Diego Blood Bank (https://www.sandiegobloodbank.org/) | N/A |
Chemicals, Peptides, and Recombinant Proteins | ||
α-MEM culture medium | Fisher Scientific | Cat#12634 |
Horse serum | Fisher Scientific | Cat#16050130 |
AIM V medium | Fisher Scientific | Cat# 31035025 |
Fetal bovine serum | Fisher Scientific | Cat# 10437010 |
TransDux MAX Lentivirus Transduction Enhancer | System Biosciences Inc. | Cat#LV860A-1 |
Chromium-51 | PerkinElmer | Cat#NEZ030S001MC |
Europium | PerkinElmer | Cat# AD0024 |
CellEvent™ Caspase-3/7 Green Detection Reagent | Thermo fisher | Cat#C10423 |
IncuCyte® Caspase-3/7 Green Apoptosis Assay Reagent | Essenbioscience | Cat#4440 |
zeomycin | Thermo Fisher | Cat#r25001 |
GolgiStop | BD Biosciences | Cat#554724 |
GolgiPlug | BD Biosciences | Cat#555029 |
NgoMIV | New England Biotechnology | Cat#R0564 |
SbfI | New England Biotechnology | Cat#R0642 |
Gateway LR Clonase II Enzyme mix | Thermo Fisher | Cat# 11791100 |
Gateway BP Clonase II Enzyme mix | Thermo Fisher | Cat#11789020 |
Recombinant human IL-2 | Proleukin | Cat#NDC-66483-116- 07 |
Recombinant human IL-3 | Pepro Technology Inc. | Cat#200-03 |
Recombinant human IL-7 | R&D Systems | Cat#207-IL |
Recombinant human IL-15 | R&D Systems | Cat#247-IL |
Recombinant human FLT-3 Ligand | Pepro Technology Inc. | Cat#300-19 |
Recombinant human SCF | R&D Systems | Cat#255-SC/CF |
Recombinant human VEGF | R&D Systems | Cat#293-VE |
Recombinant human BMP-4 | R&D Systems | Cat#314-BP |
Recombinant human bFGF basic | R&D Systems | Cat#4114-TC |
Critical Commercial Assays | ||
Pierce™ Classic Magnetic IP/Co-IP Kit | Thermo Fisher | Cat#88804 |
Dynabeads Human T-Activator CD3/CD28 | Thermo Fisher | Cat#11132D |
EasySep™ Human T Cell Isolation Kit | Stemcell technologies | Cat#17951 |
Mem-PER™ Plus Membrane Protein Extraction Kit | Thermo Fisher | Cat#89842 |
Human IFN-gamma Quantikine ELISA Kit | R&D Systems | Cat#SIF50 |
Human TNF-alpha Quantikine ELISA Kit | R&D Systems | Cat#STA00C |
IL-6 Human ELISA Kit | Thermo Fisher | Cat#EH2IL6 |
Cell Line Optimization 4D-Nucleofector® X Kit | Lonza | Cat#V4XC-9064 |
P3 Primary Cell 4D-Nucleofector® X Kit L | Lonza | Cat#V4XP-3012 |
Experimental Models: Cell Lines | ||
Human: iPS cells | Dan Kaufman lab | N/A |
Human: NK 92 cells | ATCC | Cat#CRL-2407 |
Human: K-562 cells | ATCC | Cat#CCL-243 |
Human: MA148 cells | Sundaram Ramakrishnan lab | N/A |
Human: A1847 cells | Reuben Harris lab | N/A |
Human: artificial Antigen Presenting cells | Dean A. Lee lab | N/A |
Experimental Models: Organisms/Strains | ||
Mouse: NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ | Jackson lab | Cat#005557 |
Oligonucleotides | ||
Primer for human RNase gene (Forward :5′-GCG GAG GGA AGC TCA TCA G-3′; reverse: 5′-CTG GCC CTA GTC TCA GAC CTT-3′) | This paper | N/A |
Primer for GFP:zeo (Forward :5′-ATT CTG GTT GAG CTG GAT GG-3′; reverse: 5′-GTC AGG GTG GTC ACC AGA GT-3′: | This paper | N/A |
Recombinant DNA | ||
Sequence (g-block): anti-mesothelin scFv | Chowdhury et al., 1998 | N/A |
gBlocks gene fragment: human CD8a extraocular domain | NCBI Reference Sequence: NM_001768 | N/A |
gBlocks gene fragment: human CD28 transmembrane domain | NCBI Reference Sequence: NM_006139.3 | N/A |
gBlocks gene fragment: human CD28 intraocular domain | NCBI Reference Sequence: NM_006139.3 | N/A |
gBlocks gene fragment: human CD137 intraocular domain | NCBI Reference Sequence: NM_001561.5 | N/A |
gBlocks gene fragment: human CD3zata intraocular domain | NCBI Reference Sequence: NM_198053.2 | N/A |
gBlocks gene fragment: human CD16 transmembrane domain | NCBI Reference Sequence: NM_001127593.1 | N/A |
gBlocks gene fragment: human NKp44 transmembrane domain | NCBI Reference Sequence: NM_001199509.1 | N/A |
gBlocks gene fragment: human NKp46 transmembrane domain | NCBI Reference Sequence: NM_001145457.2 | N/A |
gBlocks gene fragment: human NKG2D transmembrane domain | NCBI Reference Sequence: NM_007360.3 | N/A |
gBlocks gene fragment: human 2B4 intraocular domain | NCBI Reference Sequence: NM_001166663.1 | N/A |
gBlocks gene fragment: human DAP10 intraocular domain | NCBI Reference Sequence: NM_001007469.1 | N/A |
gBlocks gene fragment: human DAP12 intraocular domain | NCBI Reference Sequence: NM_198125.2 | N/A |
Software and Algorithms | ||
Prism version7 | Prism Graphpad | N/A |
FlowJo | https://www.flowjo.com/ | N/A |
Odyssey imaging systems | IL-DOR | N/A |
IncuCyte real-time image system | Essenbioscience | N/A |
Xenogen IVIS imaging system | Caliper Life Science | N/A |
ImageJ | https://imagej.nih.gov/ij/ | N/A |