Table 2. Microbial species annotation details.
| species | domain | # sites | COG | STRING |
|---|---|---|---|---|
| Acidimicrobium ferrooxidans DSM 10331 | B | 2 | y | y |
| Acidiphilium acidophilum ATCC 27807 | B | 3 | ||
| Acidiphilium cryptum JF-5 | B | 4 | y | y |
| Acidiphilium rubrum ATCC 35905 | B | 1 | ||
| Acidiphilium strain SJH | B | 1 | ||
| Acidithiobacillus albertensis strain DSM 14366 | B | 1 | ||
| Acidithiobacillus caldus ATCC 51756 | B | 3 | y | y |
| Acidithiobacillus ferrivorans SS3 | B | 4 | y | y |
| Acidithiobacillus ferrooxidans ATCC 23270 | B | 11 | y | y |
| Acidithiobacillus ferrooxidans ATCC 53993 | B | 1 | y | y |
| Acidithiobacillus thiooxidans ATCC 19377 | B | 4 | ||
| Acidobacterium capsulatum ATCC 51196 | B | 3 | y | y |
| Acidobacterium strain Thars1 | B | 1 | ||
| Acidocella aromatica strain PFBC | B | 1 | ||
| Acidocella facilis ATCC 35904 | B | 2 | y | |
| Acidovorax sp. JS42 | B | 1 | y | y |
| Alicyclobacillus acidocaldarius DSM 446 | B | 2 | y | y |
| Alicyclobacillus disulfidooxidans | B | 1 | ||
| Alicyclobacillus pomorum DSM 14955 | B | 1 | y | |
| Candidatus Micrarchaeum acidiphilum ARMAN-2 | A | 2 | ||
| Candidatus Parvarchaeum acidiphilum ARMAN-4 | A | 2 | y | |
| Candidatus Parvarchaeum acidophilus ARMAN-5 | A | 2 | y | |
| Ferrimicrobium acidiphilum DSM 19497 | A | 1 | y | |
| Ferroplasma acidarmanus fer1 | A | 2 | y | y |
| Ferroplasma acidiphilum | A | 2 | ||
| Ferroplasma cupricumulans | A | 1 | ||
| Ferrovum myxofaciens P3G | B | 4 | y | |
| Leptospirillum ferriphilum DSM 14647 | B | 6 | y | |
| Leptospirillum ferriphilum ML-04 | B | 1 | y | |
| Leptospirillum ferriphilum Sp-Cl | B | 1 | ||
| Leptospirillum ferrodiazotrophum | B | 1 | ||
| Leptospirillum sp. Group IV UBA | B | 3 | y | |
| Leptospirillum ferrooxidans C2-3 | B | 9 | y | |
| Leptospirillum rubarum (group II) | B | 2 | ||
| Picrophilus torridus DSM 9790 | A | 3 | y | y |
| Sulfobacillus Benefaciens | B | 1 | ||
| Sulfobacillus thermosulfidooxidans str. Cutipay | B | 2 | y | |
| Sulfobacillus thermotolerans | B | 2 | ||
| Sulfolobus acidocaldarius DSM 639 | A | 1 | y | y |
| Thermoplasma acidophilum DSM 1728 | A | 1 | y | Y |
| Thiobacillus prosperus DSM 5130 | B | 1 | ||
| Thiomonas arsenitoxydans 3As | B | 1 | y | Y |
Given is the microbial species name and domain (A: Archaea; B: Bacteria), and number of mining sites with positive identification of a given species, complemented with molecular annotation coverage on the level of COG (“y”) and availability of interaction information from STRING (“y”).