Table 1.
List of putative taxa of morphotypes (MT 1-30) isolated from pedunculate oak (Quercus robur L.) twigs and their relative abundance (no. emerged isolates belonging to MT pooled per twig/total no. of pooled isolates recovered) in different vitality classes (L, low; M, medium; and H, high) and in different tissue types (B, bark; X, xylem).
| MT No. | Putative taxon | Isolates | Relative abundance by vitality and tissue |
Genbank accession numbers | ||||
|---|---|---|---|---|---|---|---|---|
| H | M | L | B | X | ||||
| 1 | Aureobasidium pullulans | 5 | 0.3 | 0.3 | 1.0 | 0.3 | 1.3 | JX462673.1† ∗∗∗ |
| 2 | Melanconiella chrysomelanconium | 2 | 0.3 | 0.3 | 0 | 0.7 | 0 | KX815458; KX815459 |
| 3 | Tubakia dryina | 43 | 4.9 | 3.9 | 5.2 | 12.7 | 1.3 | KX815460†; KX815461† |
| 4 | Unknown | 7 | 1.0 | 0.3 | 1.0 | 2.0 | 0.3 | ∗ |
| 5 | Lophiostoma corticola | 11 | 0.7 | 1.0 | 2.0 | 3.3 | 0.3 | KX815462; KX815463 |
| 6, 14 | Pyrenochaeta cava | 2 | 0.3 | 0.3 | 0 | 0.7 | 0 | KX815464; KX815465 KX815477†; KX815478† |
| 7 | Pezicula sporulosa | 2 | 0.7 | 0 | 0 | 0.7 | 0 | KX815466; KX815467 |
| 8 | Unknown | 3 | 0 | 0 | 1.0 | 1.0 | 0 | ∗ |
| 9 | Phoma sp. 1 | 5 | 0.7 | 0 | 1.0 | 1.6 | 0 | KX815468†; KX815469† |
| 10 | Dothideomycetes sp. 1 | 11 | 0.3 | 1.6 | 1.6 | 3.6 | 0 | KX815470; KX815471 |
| 11 | Sordariomycetes sp. 1 | 12 | 1.6 | 0.7 | 1.6 | 3.9 | 0 | KX815472; KX815473 |
| 12 | Amphiporthe leiphaemia | 3 | 0 | 0.3 | 0.7 | 1.0 | 0 | KX815474; KX815475 |
| 13 | Pezicula sp.1 | 18 | 1.3 | 0.7 | 3.9 | 2.0 | 3.9 | KX815475; KX815476 |
| 15 | Phaeomoniella sp. 1 | 10 | 1.0 | 0.7 | 1.6 | 2.3 | 1.0 | KX815479; KX815480 |
| 16 | Sordariomycetes sp. 2 | 4 | 0 | 0.7 | 0.7 | 1.3 | 0 | KX815481; KX815482 |
| 17 | Unknown | 2 | 0.3 | 0 | 0.3 | 0.3 | 0.3 | ∗ |
| 18 | Pleosporineae sp. 1 | 5 | 0.7 | 0.7 | 0.3 | 0.7 | 1.0 | KX815483; KX815484 |
| 19 | Dothideomycetes sp. 2 | 3 | 0.3 | 0 | 0.7 | 0.3 | 0.7 | KX815485; KX815486 |
| 20 | Ascomycetes sp.1 | 4 | 0 | 0 | 1.3 | 0 | 1.3 | KX815487; KX815488 |
| 21 | Phoma sp. 2 | 2 | 0 | 0 | 0.7 | 0 | 0.7 | KX815489; |
| 22, 23 | Colpoma quercinum | 57 | 6.9 | 6.9 | 4.9 | 17.6 | 1.0 | KX815490; KX815491; KX815492 |
| 24 | Unknown | 3 | 0.7 | 0.3 | 0 | 0.7 | 0.3 | ∗ |
| 25 | Unknown | 3 | 0 | 0.7 | 0.3 | 0.3 | 0.7 | ∗ |
| 26 | Unknown | 2 | 0.3 | 0 | 0.3 | 0.7 | 0 | ∗ |
| 27 | Ascomycetes sp.2 | 11 | 1.3 | 2.0 | 0.3 | 3.6 | 0 | KX815493; KX815494 |
| 28 | Unknown | 7 | 0.7 | 1.3 | 0.3 | 2.0 | 0.3 | ∗ |
| 29 | Eurotiomycetes sp. 1 | 15 | 1.3 | 1.0 | 2.6 | 4.6 | 0.3 | KX815495; KX815496 |
| 30 | Unknown | 54 | 3.6 | 6.2 | 7.8 | 11.1 | 6.5 | ∗∗ |
GenBank accession numbers indicate the GenBank identifier of the corresponding ITS sequences. †Specimen morphologically matched to previous culture collection. ∗ Specimen not sequenced. ∗∗ Combined group of singletons. ∗∗∗ Endophyte identified in previous study.