Table 1.
Multilocus sequence typing (MLST) of 164 CMY-2-producing Escherichia coli from different sources, 2008-2013, Germany
| MLST E. coli human patients |
MLST E. coli from food | MLST E. coli from livestock animals | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chicken | turkey | pork | chicken | turkey | pig | cattle | |||||||||
| ST | n | ST | n | ST | n | ST | n | ST | n | ST | n | ST | n | ST | n |
| ST131 | 6 (13.0%) | ST38 | 9 | ST10 | 1 | ST10 | 2 | ST117 | 6 | ST1196 | 3 | ST1196 | 3 | ST88 | 1 |
| ST10 | 4 | ST58 | 5 | ST5763 | 1 | ST75 | 1 | ST38 | 6 | ST212 | 1 | ST38 | 1 | ||
| ST69 | 3 | ST57 | 5 | ST2040 | 1 | ST131 | 5 (12.2%) | ST10 | 1 | ||||||
| ST38 | 3 | ST117 | 5 | ST117 | 1 | ST3778 | 4 | ST3778 | 1 | ||||||
| ST354 | 2 | ST69 | 4 | ST6008 | 1 | ST429 | 3 | ST57 | 1 | ||||||
| ST58 | 2 | ST429 | 3 | ST421 | 1 | ST57 | 3 | ST1594 | 1 | ||||||
| ST453 | 2 | ST2040 | 3 | ST1463 | 1 | ST2040 | 3 | ST2040 | 1 | ||||||
| ST1844 | 1 | ST68 | 2 | ST420 | 1 | ||||||||||
| ST59 | 1 | ST131 | 2 (3.8%) | ST1158 | 1 | ||||||||||
| ST141 | 1 | ST155 | 2 | ST540 | 1 | ||||||||||
| ST744 | 1 | ST569 | 1 | ST1196 | 1 | ||||||||||
| ST224 | 1 | ST1286 | 1 | ST155 | 1 | ||||||||||
| ST4759 | 1 | ST420 | 1 | ST2309 | 1 | ||||||||||
| ST23 | 1 | ST10 | 1 | ST162 | 1 | ||||||||||
| ST117 | 1 | ST4937 | 1 | ST2458 | 1 | ||||||||||
| ST2450 | 1 | ST1818 | 1 | ST354 | 1 | ||||||||||
| ST448 | 1 | ST115 | 1 | ST10 | 1 | ||||||||||
| ST348 | 1 | ST1594 | 1 | ST212 | 1 | ||||||||||
| ST457 | 1 | ST373 | 1 | ||||||||||||
| ST86 | 1 | ST108 | 1 | ||||||||||||
| ST1463 | 1 | ST752 | 1 | ||||||||||||
| ST93 | 1 | ST350 | 1 | ||||||||||||
| ST648 | 1 | ST354 | 1 | ||||||||||||
| ST127 | 1 | ||||||||||||||
| ST694 | 1 | ||||||||||||||
| ST115 | 1 | ||||||||||||||
| ST2077 | 1 | ||||||||||||||
| ST393 | 1 | ||||||||||||||
| ST963 | 1 | ||||||||||||||
| ST355 | 1 | ||||||||||||||
| ST362 | 1 | ||||||||||||||
| Total | 46 | 53 | 7 | 3 | 41 | 3 | 9 | 2 | |||||||
Proportion of the most frequent sequence type ST131 in the respective source is given in %