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. 2018 Aug 9;4:22. doi: 10.1186/s40851-018-0108-9

Table 1.

PCR primers used for the expression analysis and the preparation of the templates for the cRNA probes used in in situ hybridization

Target cDNA Upstream primer Downstream primer Region Genbank acc. no. aa. identitiy (%) to Deroceras gene
FMRFamide agacgataagctccaccgctttg tcttcagcctgaacgtatgacgc 83–300 (2–219) AB546959 (AB546960) 79.1
LFRFamide1 atgatcaagagtcagctctcag atcgctgtcactaccccagtg 15–563 LC375313 83.1
LFRFamide2 cgactctgataaaaggggctcc atgtgactactgggaacgccag 566–1021 LC375314 70.6
CCK/SK1 cgctgcccacactgaacaag ggtttcattgttgttggcgaag 743–1111 LC375319 73.5
CCK/SK2 agagcacaccactgaaggac tcggatgtgtcggggttta 451–912 LC375320 82.4
NP-F1 gttgctctaataatttgctcgggag gccgccatgtttgttagttgac 303–782 LC375315 91.7
NP-F2 caacacactacgcccacacag ctgttcacgagtgtgctcgag 972–1520 LC375316 92.9
pedal peptide atagaatcgctggtgcgtcgag cgccgttatcgctgagttcatg 4219–4716 LC375323 –
FaRP-A tgacgagctcgatacgacctatg cctcgtggtcaaaccttctgaac 399–967 LC375321 –
FaRP-B agaccagcgtgcgcaccag ctgggccagcagacattgac 144–650 LC375322 –
luqin1 ccacccttaagtcagcaactc ggaatagaaacacaggagagcgatg 401–1051 LC375317 88.7
luqin2 ctcttgtctcatctgcccacac agctatccgaaccgtgtgagtc 19–552 LC375318 65.4
18S rRNA gcttaccaagctccgaccctcgtgg cgtcactacctccccgtgccggg 62–383 LC375324 –

The accession numbers of the Limax RFamide cDNAs and the amino acid identities of precursors to the corresponding Deroceras homologues are shown in the right columns. The numerals in the “region” column indicate the amplified cDNA regions in the sequence data deposited in Genbank. The information for the splice variant of FMRFamide (FMRFamide Type II) is shown in parentheses