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. 2018 Jun 18;4(7):440–452. doi: 10.1038/s41477-018-0172-3

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 4 — a, Phylogeny of orthogroup 1 from Figs. 3d and 4b, established from the nucleotide-binding domains of 1,641 NB–LRR genes. Branches for trees and herbaceous species are shown in brown and green, respectively. Branches expanded in oak are shaded. For a higher resolution image see Supplementary Fig. 6. b, Scatter plot showing orthogroups expanded in trees and herbaceous plants (images from http://openclipart.org). Numbers in square brackets associated with circle sizes stand for -log(P-adjust), where P-adjust is the P-value of the binomial test adjusted for multiple testing.