Table II.
Dysregulated miRNAs in patients 2203 and 1674.
miRNA ID | Patient 2203 vs. normal pool
|
Patient 1674 vs. normal pool
|
||||
---|---|---|---|---|---|---|
Fold-change | P-value | adj-P-value | Fold-change | P-value | adj-P-value | |
Common miRNAs | ||||||
Upregulated | ||||||
hsa-miR-210 | 13.694 | 4.119×10−09 | 1.110×10−06 | 18.204 | 1.344×10−09 | 9.051×10−07 |
hsa-miR-155-5p | 6.695 | 7.973×10−06 | 4.130×10−04 | 7.965 | 2.615×10−04 | 2.887×10−03 |
hsa-miR-342-3p | 3.389 | 1.927×10−06 | 1.527×10−04 | 3.132 | 1.483×10−07 | 1.537×10−05 |
hsa-miR-34a-5p | 3.373 | 2.187×10−04 | 3.983×10−03 | 2.519 | 7.045×10−04 | 5.858×10−03 |
hsa-miR-1274a | 2.853 | 1.377×10−04 | 2.995×10−03 | 2.441 | 3.774×10−05 | 7.159×10−04 |
hsa-miR-720 | 2.773 | 9.353×10−05 | 2.348×10−03 | 2.265 | 9.233×10−05 | 1.353×10−03 |
hsa-miR-122-5p | 2.696 | 9.032×10−06 | 4.345×10−04 | 3.808 | 4.595×10−05 | 8.253×10−04 |
hsa-miR-150-5p | 2.645 | 1.554×10−04 | 3.271×10−03 | 3.333 | 7.686×10−05 | 1.204×10−03 |
hsa-miR-1274b | 2.531 | 6.167×10−04 | 7.416×10−03 | 2.235 | 1.829×10−05 | 4.663×10−04 |
hsa-miR-34b-5p | 2.472 | 1.131×10−03 | 1.199×10−02 | 2.239 | 7.917×10−05 | 1.226×10−03 |
hsa-miR-106b-5p | 2.463 | 8.830×10−03 | 4.815×10−02 | 2.191 | 1.354×10−06 | 7.601×10−05 |
hsa-miR-25-3p | 2.361 | 5.440×10−05 | 1.629×10−03 | 2.343 | 3.438×10−07 | 2.724×10−05 |
hsa-miR-93-5p | 2.342 | 3.627×10−05 | 1.164×10−03 | 2.209 | 1.910×10−07 | 1.838×10−05 |
hsa-miR-885-5p | 2.059 | 7.217×10−05 | 1.984×10−03 | 2.749 | 4.733×10−04 | 4.438×10−03 |
Downregulated | ||||||
hsa-miR-762 | −2.148 | 6.373×10−04 | 7.597×10−03 | −2.456 | 3.143×10−06 | 1.520×10−04 |
hsa-miR-4270 | −2.167 | 1.655×10−03 | 1.538×10−02 | −2.318 | 7.754×10−06 | 2.611×10−04 |
hsa-miR-218-5p | −2.259 | 1.106×10−04 | 2.701×10−03 | −2.030 | 3.164×10−03 | 1.661×10−02 |
hsa-miR-30a-3p | −2.371 | 3.591×10−05 | 1.164×10−03 | −2.185 | 6.318×10−05 | 1.051×10−03 |
hsa-miR-1207-5p | −2.380 | 2.682×10−03 | 2.101×10−02 | −2.425 | 7.777×10−04 | 6.349×10−03 |
hsa-miR-199a-3p | −2.382 | 5.068×10−03 | 3.354×10−02 | −3.405 | 6.913×10−03 | 3.053×10−02 |
hsa-miR-188-5p | −2.474 | 3.029×10−05 | 1.046×10−03 | −2.172 | 3.194×10−06 | 1.520×10−04 |
hsa-miR-30c-5p | −2.477 | 2.188×10−04 | 3.983×10−03 | −2.108 | 3.468×10−05 | 6.970×10−04 |
hsa-miR-1225-5p | −2.485 | 3.166×10−03 | 2.331×10−02 | −2.403 | 7.302×10−04 | 6.034×10−03 |
hsa-miR-4286 | −2.487 | 1.325×10−09 | 7.936×10−07 | −2.279 | 6.848×10−08 | 1.004×10−05 |
hsa-miR-30a-5p | −2.490 | 8.286×10−06 | 4.134×10−04 | −2.253 | 5.463×10−06 | 2.230×10−04 |
hsa-miR-4284 | −2.718 | 3.360×10−03 | 2.446×10−02 | −4.295 | 7.493×10−06 | 2.611×10−04 |
hsa-miR-660-5p | −2.813 | 4.062×10−05 | 1.244×10−03 | −2.239 | 4.978×10−04 | 4.530×10−03 |
hsa-miR-642b-3p | −2.863 | 3.629×10−05 | 1.164×10−03 | −2.775 | 4.850×10−08 | 1.004×10−05 |
hsa-miR-135a-5p | −2.965 | 1.202×10−06 | 1.233×10−04 | −2.413 | 3.352×10−06 | 1.520×10−04 |
hsa-miR-630 | −3.208 | 2.354×10−03 | 1.880×10−02 | −3.347 | 3.092×10−08 | 8.330×10−06 |
hsa-miR-363-3p | −3.319 | 2.369×10−04 | 4.200×10−03 | −2.378 | 1.989×10−05 | 4.871×10−04 |
hsa-miR-200b-3p | −3.577 | 5.841×10−05 | 1.684×10−03 | −2.609 | 2.844×10−05 | 5.918×10−04 |
hsa-miR-429 | −3.657 | 1.300×10−04 | 2.917×10−03 | −2.893 | 2.199×10−05 | 5.197×10−04 |
hsa-miR-1202 | −3.772 | 6.780×10−04 | 7.613×10−03 | −2.993 | 1.971×10−03 | 1.149×10−02 |
hsa-miR-141-3p | −9.901 | 1.767×10−09 | 7.936×10−07 | −9.272 | 9.951×10−07 | 5.828×10−05 |
hsa-miR-200c-3p | −12.485 | 3.817×10−09 | 1.110×10−06 | −11.832 | 9.017×10−07 | 5.784×10−05 |
Specific miRNAs of patient 2203 | ||||||
Upregulated | ||||||
hsa-miR-21-3p | 2.705 | 1.544×10−05 | 6.710×10−04 | 1.845 | 1.092×10−03 | 7.619×10−03 |
hsa-miR-1260b | 2.461 | 2.786×10−04 | 4.750×10−03 | 1.968 | 1.898×10−04 | 2.265×10−03 |
hsa-miR-320d | 2.359 | 1.634×10−04 | 1.538×10−02 | 1.756 | 3.132×10−03 | 1.654×10−02 |
hsa-miR-181b-5p | 2.339 | 4.412×10−08 | 9.083×10−06 | 1.983 | 3.519×10−05 | 6.970×10−04 |
hsa-miR-1260a | 2.261 | 6.489×10−04 | 7.613×10−03 | 1.922 | 8.246×10−04 | 6.573×10−03 |
hsa-miR-452-5p | 2.245 | 4.431×10−03 | 3.045×10−02 | 1.382 | 1.265×10−02 | 4.801×10−02 |
hsa-miR-130b-3p | 2.243 | 1.656×10−06 | 1.394×10−04 | 1.742 | 2.452×10−06 | 1.270×10−04 |
hsa-miR-320e | 2.178 | 5.735×10−04 | 7.087×10−03 | 1.837 | 2.525×10−05 | 5.755×10−04 |
hsa-miR-320b | 2.168 | 7.956×10−04 | 8.856×10−03 | 1.714 | 2.918×10−04 | 3.144×10−03 |
hsa-miR-342-5p | 2.129 | 1.601×10−05 | 6.741×10−04 | 1.971 | 1.339×10−07 | 1.503×10−05 |
hsa-miR-223-3p | 2.056 | 2.665×10−04 | 4.602×10−03 | 1.867 | 9.326×10−03 | 3.830×10−02 |
hsa-miR-181a-5p | 2.019 | 9.307×10−04 | 1.011×10−02 | 1.932 | 1.444×10−05 | 4.052×10−04 |
Downregulated | ||||||
hsa-miR-362-3p | −2.317 | 5.680×10−04 | 7.087×10−03 | −1.826 | 2.457×10−03 | 1.385×10−02 |
hsa-miR-200a-3p | −2.552 | 1.657×10−04 | 3.433×10−03 | −1.575 | 3.224×10−02 | ns |
hsa-miR-10a-5p | −3.326 | 4.392×10−04 | 5.915×10−03 | −1.965 | 4.617×10−02 | ns |
Specific miRNAs of patient 1674 | ||||||
Upregulated | ||||||
hsa-miR-142-3p | 2.941 | 2.613×10−02 | ns | 4.372 | 1.588×10−03 | 9.811×10−03 |
hsa-miR-489 | 1.231 | ns | ns | 3.434 | 1.139×10−02 | 4.447×10−02 |
hsa-miR-142-5p | 2.116 | ns | ns | 3.205 | 1.006×10−03 | 7.348×10−03 |
hsa-miR-494 | 1.975 | 1.863×10−03 | 1.647×10−02 | 2.621 | 1.116×10−03 | 7.709×10−03 |
hsa-miR-126-3p | 1.940 | 1.606×10−03 | 1.538×10−02 | 2.191 | 1.047×10−04 | 1.454×10−03 |
hsa-miR-15a-5p | 1.569 | ns | ns | 2.187 | 1.493×10−05 | 4.103×10−04 |
hsa-miR-15b-5p | 1.045 | 1.237×10−02 | ns | 2.181 | 1.112×10−03 | 1.488×10−03 |
hsa-miR-455-5p | 1.230 | ns | ns | 2.096 | 4.226×10−05 | 7.798×10−04 |
hsa-miR-140-3p | 1.840 | 5.298×10−04 | 6.796×10−03 | 2.032 | 1.710×10−04 | 2.105×10−03 |
hsa-miR-4306 | 1.368 | 3.099×10−03 | 2.306×10−02 | 2.005 | 3.613×10−04 | 3.632×10−03 |
hsa-miR-185-5p | 1.387 | 2.402×10−02 | ns | 2.005 | 9.862×10−04 | 7.339×10−03 |
Downregulated | ||||||
hsa-miR-4299 | −1.489 | ns | ns | −2.035 | 1.415×10−05 | 4.052×10−04 |
hsa-miR-4254 | −1.879 | 3.745×10−03 | 2.660×10−02 | −2.081 | 3.636×10−06 | 1.531×10−04 |
hsa-miR-204-5p | −5.917 | 2.029×10−02 | ns | −2.12 | 8.344×10−03 | 3.491×10−02 |
hsa-miR-1268a | −1.486 | ns | ns | −2.264 | 1.260×10−05 | 3.689×10−04 |
hsa-miR-574-3p | −1.526 | 3.078×10−02 | ns | −2.314 | 9.952×10−07 | 5.828×10−05 |
hsa-miR-10b-5p | −1.881 | 1.377×10−02 | ns | −2.338 | 8.231×10−03 | 3.463×10−02 |
hsa-let-7a-5p | −1.933 | 1.263×10−03 | 1.288×10−02 | −2.377 | 1.679×10−03 | 1.014×10−02 |
hsa-miR-4281 | −1.917 | 7.692×10−03 | 4.525×10−02 | −2.529 | 8.819×10−05 | 1.320×10−03 |
miR, microRNA; ns, not significant.