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. 2018 Jul 16;13(8):1162–1171. doi: 10.2215/CJN.09100817

Table 3.

Finally identified variants in MODY families and the results of the predictive program

Family ID Gene Type of MODY Chromosome:Position rs Variant Minor Allele Frequency Polyphen2 Sorting Intolerant From Tolerant
1 WFS1 14 4:6303248 rs1805069 exon8: c.1726G->A: p.G576S 0.022364 0.882 0.031
2 WFS1 14 4:6303248 rs1805069 exon8: c.1726G->A: p.G576S 0.022364 0.882 0.031
3 WFS1 14 4:6303248 rs1805069 exon8: c.1726G->A: p.G576S 0.022364 0.882 0.031
CEL 8 9: 135937390 rs534848722 exon1: c.10A>G: p.M4V 0.000199681 0.994 0.149
4 PAX4 9 7:127253551 rs3824004 exon5: c.574G->T: p.R192S 0.004593 0.998 0.0
5 PAX4 9 7:127253551 rs3824004 exon5: c.574G->T: p.R192S 0.004593 Has been reported
www.ncbi.nlm.nih.gov/clinvar/variation/358801/
6 CEL 8 9: 135942033 NA exon5: c.664A>G NA 1.0 0.033
p.S222G
7 HNF1B 5 17:36091624 NA exon4: c.1007A>G: p.H336R NA Has been reported (1)
8 WFS1 14 4:6304118 rs3821945 exon8: c.2596G>A 0.00658946 0.95 0.274
p.D866N Hotspot for pathogenic mutations
9 ABCC8 12 11: 17482222 rs185040406 exon6: c.824G>A 0.0008 Has been reported
p.R275Q

Polyphen2: ranges from 0 to 1. The amino acid substitution is predicted tolerated if the score is <0.5, and deleterious if the score is ≥0.5. The higher score, the more likely the variant to be damaging. Sorting Intolerant From Tolerant: ranges from 0 to 1. The amino acid substitution is predicted deleterious if the score is <0.0, and tolerated if the score is ≥0.05. The lower score, the more likely the variant to be damaging. MODY, maturity-onset diabetes in young; NA, not available.