Table 3.
Family ID | Gene | Type of MODY | Chromosome:Position | rs | Variant | Minor Allele Frequency | Polyphen2 | Sorting Intolerant From Tolerant |
---|---|---|---|---|---|---|---|---|
1 | WFS1 | 14 | 4:6303248 | rs1805069 | exon8: c.1726G->A: p.G576S | 0.022364 | 0.882 | 0.031 |
2 | WFS1 | 14 | 4:6303248 | rs1805069 | exon8: c.1726G->A: p.G576S | 0.022364 | 0.882 | 0.031 |
3 | WFS1 | 14 | 4:6303248 | rs1805069 | exon8: c.1726G->A: p.G576S | 0.022364 | 0.882 | 0.031 |
CEL | 8 | 9: 135937390 | rs534848722 | exon1: c.10A>G: p.M4V | 0.000199681 | 0.994 | 0.149 | |
4 | PAX4 | 9 | 7:127253551 | rs3824004 | exon5: c.574G->T: p.R192S | 0.004593 | 0.998 | 0.0 |
5 | PAX4 | 9 | 7:127253551 | rs3824004 | exon5: c.574G->T: p.R192S | 0.004593 | Has been reported | |
www.ncbi.nlm.nih.gov/clinvar/variation/358801/ | ||||||||
6 | CEL | 8 | 9: 135942033 | NA | exon5: c.664A>G | NA | 1.0 | 0.033 |
p.S222G | ||||||||
7 | HNF1B | 5 | 17:36091624 | NA | exon4: c.1007A>G: p.H336R | NA | Has been reported (1) | |
8 | WFS1 | 14 | 4:6304118 | rs3821945 | exon8: c.2596G>A | 0.00658946 | 0.95 | 0.274 |
p.D866N | Hotspot for pathogenic mutations | |||||||
9 | ABCC8 | 12 | 11: 17482222 | rs185040406 | exon6: c.824G>A | 0.0008 | Has been reported | |
p.R275Q |
Polyphen2: ranges from 0 to 1. The amino acid substitution is predicted tolerated if the score is <0.5, and deleterious if the score is ≥0.5. The higher score, the more likely the variant to be damaging. Sorting Intolerant From Tolerant: ranges from 0 to 1. The amino acid substitution is predicted deleterious if the score is <0.0, and tolerated if the score is ≥0.05. The lower score, the more likely the variant to be damaging. MODY, maturity-onset diabetes in young; NA, not available.