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. 2018 Apr 6;50(7):495–503. doi: 10.1152/physiolgenomics.00002.2018

Table 1.

Transcriptome assembly statistics

Sequenced bases 62.25 billion
Reads per sample 41.50 ± 2.64 million
Assembled bases 1.09 billion
Trinity transcripts 1,830,330
Trinity genes 1,635,200
Mean contig length 832 bp
Median contig length 425 bp
Annotated transcripts 389,363
Complete vertebrate BUSCOs 81.2%
Duplicated BUSCOs 36.3%
Fragmented BUSCOs 15.5%
Missing BUSCOs 3.2%
Read alignment rate 87.0%

BUSCOs, Benchmarking Universal Single-Copy Orthologs, or highly conserved gene orthologs that are expected to be expressed in all vertebrates.