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. 2018 Aug 1;7:e35898. doi: 10.7554/eLife.35898

Table 3. Identified cross-linked peptides of Commd9 and NN-CH domain of CCDC93.

Predicted mass (Da) Observed mass (Da) Error (ppm) xQuest score
Cross-linked peptides
Sample 1: Commd9 - Commd9
2751.419 2751.407 2.3 21.10 VDIK(133)TSSDSISR-VDIK(133)TSSDSISR
2305.209 2305.206 3.0 20.35 ASSK(21)DVVR-VDIK(133)TSSDSISR
4316.319 4316.306 3.2 18.78 DLSSAEAILALFPENFHQNLK(95)NLLTK(100)IILEHVSTWR
3266.789 3266.782 1.8 18.67 NLLTK(100)IILEHVSTWR-VDIK(133)TSSDSISR
2820.589 2820.579 2.4 17.28 ASSK(21)DVVR-NLLTK(100)IILEHVSTWR
3648.889 3648.881 1.0 15.22 LVDLDWRVDIK()TSSDSISR-VDIK(133)TSSDSISR
3202.679 3202.677 2.0 14.22 ASSK(21)DVVR-LVDLDWRVDIK(133)TSSDSISR
2571.299 2571.288 4.1 12.78 IQEDPSLCGDK(163)PSISAVTVELSK(175)
1859.009 1859.006 2.7 12.40 ASSK(21)DVVR-ASSK(21)DVVR
Sample 2: Commd9 - CCDC93
2998.479 2998.476 1.5 16.86 VDIK(133)TSSDSISR AIETK(131)EEMGDYIR
3513.859 3513.842 1.4 14.74 NLLTK(100)IILEHVSTWR AIETK(131)EEMGDYIR
4772.479 4772.501 5.1 7.11 MAVPTCLLQMK(152)IQEDPSLCGDKPSISAVTVELSK IK(45)GLSPFDK
Commd9 - Commd9
2820.589 2820.583 1.1 18.60 ASSK(21)DVVR-NLLTK(100)IILEHVSTWR
CCDC93 - CCDC93
3569.679 3569.675 0.3 14.92 AIETK(131)EEMGDYIR-SYSVSQFQK(148)TYSLPED
Sample 3: Commd9 - Commd9
2820.589 2820.599 4.6 20.02 ASSK(21)DVVR-NLLTK(100)IILEHVSTWR
2305.209 2305.226 5.8 19.51 ASSK(21)DVVR-VDIK(133)TSSDSISR