Table 2.
Summary of RNA-Seq data.
Sample | Raw reads | Clean reads | Clean bases | Error rate (%) | Q20 (%) | Q30 (%) | GC content (%) |
---|---|---|---|---|---|---|---|
WTYES | 30430096 | 28722480 | 4.31G | 0.02 | 95.62 | 89.42 | 52.3 |
WTYES | 26018734 | 25164896 | 3.77G | 0.02 | 95.41 | 88.94 | 52.18 |
WTYES | 33291592 | 32246484 | 4.84G | 0.01 | 97.45 | 93.38 | 52.38 |
DAfRafA | 27344356 | 26437012 | 3.97G | 0.02 | 95.36 | 88.9 | 52.15 |
DAfRafA | 27222764 | 26268644 | 3.94G | 0.02 | 95.39 | 88.94 | 52.3 |
DAfRafA | 25355708 | 24273186 | 3.64G | 0.03 | 95.04 | 88.26 | 52.36 |
DAfStuA | 23060848 | 22148982 | 3.32G | 0.02 | 95.32 | 88.83 | 52.75 |
DAfStuA | 28387068 | 27318602 | 4.1G | 0.01 | 97.47 | 93.41 | 52.53 |
DAfStuA | 30533304 | 29493780 | 4.42G | 0.01 | 97.41 | 93.33 | 52.75 |
WTYEP | 23429420 | 21992086 | 3.3G | 0.02 | 96.67 | 91.59 | 51.64 |
WTYEP | 23791918 | 22660542 | 3.4G | 0.02 | 97.2 | 92.76 | 52.18 |
WTYEP | 23052088 | 21889226 | 3.28G | 0.02 | 97.11 | 92.62 | 52.32 |