Table 2.
Characteristic and evidence for conservation of intragenic Cadherin 23 (CDH23) CpG island in the human (GRCh37/hg19) and other species genomes, generated by UCSC genome Browser.
| Chromosome: position | CpG number | Length | GC number | % CpG | % C or G | Obs/Exp CpG* | Mean phyloP100 wayAll | GERP Score | DNaseI hypersensitivity cluster# |
|---|---|---|---|---|---|---|---|---|---|
| chr10:73156164-73157954 | CpG:171 | 1790 | 1121 | 19.1 | 62.6 | 0.97 | 0.392 | 0.553 | 69 |
| chr10:73533091-73533492 | CpG:49 | 401 | 299 | 24.4 | 74.6 | 0.88 | 0.123 | 0.103 | 13 |
| chr10:73565570-73565827 | CpG:26 | 258 | 173 | 20.2 | 67.1 | 0.91 | 2.942 | 2.14 | 58 |
*Ratio of observed to expected CpG; #DNaseI Hypersensitivity Clusters in 125 cell types.