Table 1.
Deviations (Å) of central atoms of TTX-binding functional groups in homology models and NavPaS from matching atoms in the Nav1.4 cryo-EM structure.
Residue | Model/structure |
|||
---|---|---|---|---|
Lipkind and Fozzard, 2000 | Tikhonov and Zhorov, 2005a | Tikhonov and Zhorov, 2012 | NavPaS | |
Y1p51 | 3.7 | 6.1 | 2.2 | 0.5 |
E1p53 | 10.3 | 8.1 | 2.4 | 0.7 |
E2p53 | 5.4 | 4.6 | 3.9 | 2.7 |
D3p54 | 4.6 | 6.6 | 6.1 | 2.4 |
D4p53 | 8.8 | 9.5 | 2.3 | 0.8 |
D1p50 | 4.2 | 3.0 | 4.4 | 2.0 |
E2p50 | 2.9 | 2.7 | 1.9 | 0.8 |
K3p50 | 1.1 | 1.6 | 1.5 | 2.0 |
A4p50 | 1.7 | 2.1 | 1.4 | 0.4 |