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. 2018 Aug 2;19:575. doi: 10.1186/s12864-018-4961-x

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© The Author(s). 2018

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — EBs and RBs show highly diverse gene expression in C. psittaci, C. abortus and W. chondrophila. The left panel shows the number of similarly and differentially expressed genes in the assigned functional categories for C. psittaci (a), C. abortus (c) and W. chondrophila (e). About half of all genes are differentially expressed in EBs and RBs (black) in all three species. The right panel shows the number of up-regulated genes in EBs (blue) and RBs (green) in C. psittaci (b), C. abortus (d) and W. chondrophila (f) within each functional category. Overrepresentation (black asterisks) and underrepresentation (magenta asterisks) of genes within the functional categories are indicated. Significance threshold is depicted by asterisks and represent p-value < 0.05 (*), p-value < 0.01 (**) and p-value < 0.001 (***)