Antibodies |
Rabbit polyclonal anti-Mtln |
custom Proteintech |
N/A |
Mouse CI monoclonal antibody (20E8C12) |
ThermoFisher |
Cat# A21348; RRID:AB_2535839 |
Mouse VDAC1 monoclonal antibody (N152B/23) |
NeuroMab |
Cat# 75–204; RRID: AB_2214807 |
Rabbit anti-subunit c of the mitochondrial ATP synthase Antibody |
a gift from Dr. Elizabeth F. Neufeld |
N/A |
Total OXPHOS Rodent WB Antibody Cocktail |
Abcam |
Cat# ab110413, RRID:AB_2629281 |
Rabbit polyclonal OGDH antibody |
ABclonal |
Cat# A6391 |
Rabbit polyclonal ACAD9 antibody |
AVIVA |
Cat# OAAN02440 |
Rabbit Anti-VLCAD Polyclonal Antibody |
GeneTex |
Cat# GTX114232S, RRID:AB_10728154 |
Rabbit Anti-SOD2 Polyclonal Antibody |
a gift from Dr. Frederick E. Domann |
N/A |
Rabbit Anti-Glutathione Peroxidase 1 Polyclonal Antibody |
Abcam |
Cat# ab22604, RRID:AB_2112120 |
Rabbit monoclonal Glutathione Peroxidase 4 antibody |
Abcam |
Cat# ab125066, RRID:AB_10973901 |
Rabbit anti-Beta-catenin Antibody |
Sigma-Aldrich |
Cat# PLA0230 |
Peroxidase-AffiniPure Goat Anti-Mouse IgG (H+L) (min X Hu,Bov,Hrs,Rb,Sw Sr Prot) antibody |
Jackson ImmunoResearch Labs |
Cat# 115–035–146, RRID:AB_2307392 |
Peroxidase-AffiniPure Goat Anti-Rabbit IgG (H+L) (min X Hu,Ms,Rat Sr Prot) antibody |
Jackson ImmunoResearch Labs |
Cat# 111–035–144, RRID:AB_2307391 |
Mouse Anti-NDUFA9 Monoclonal Antibody, Clone 20C11 |
Abcam |
Cat# ab14713, RRID:AB_301431 |
Rabbit Anti-Human LETM1 Polyclonal Antibody |
GeneTex |
Cat# GTX112455, RRID:AB_1950806 |
Rabbit polyclonal CYCS (Cytochrome C) antibody |
ABclonal |
Cat# A0225 |
Rabbit Anti-GAPDH Polyclonal antibody |
Santa Cruz Biotechnology |
Cat# sc-25778, RRID:AB_10167668 |
Pyruvate Dehydrogenase (C54G1) Rabbit mAb antibody |
Cell Signaling Technology |
Cat# 3205S, RRID:AB_2162926 |
Rabbit polyclonal DLD antibody |
ABclonal |
Cat# A13296 |
Goat anti-Rabbit IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 568 |
Thermo Fisher Scientific |
Cat# A-11011, RRID:AB_143157 |
Goat anti-Mouse IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor Plus 488 |
Thermo Fisher Scientific |
Cat# A32723, RRID:AB_2633275 |
Mouse Anti-FLAG Monoclonal Antibody, Clone M2 |
Sigma-Aldrich |
F3165 RRID:AB_259529 |
Mouse Anti-UQCRC1 Monoclonal Antibody, Clone 16D10AD9AH5 |
Abcam |
Cat# ab110252 RRID: AB_10863633 |
Chemicals, Peptides, and Recombinant Proteins |
Human Mtln (uniprot Q8NCU8–2) 56 amino acid protein, 96% purity by HPLC |
Genescript |
Custom order |
MitoTracker® Red CMXRos |
Invitrogen |
M7512 |
MitoSOX Red Mitochondrial Superoxide Indicator |
Invitrogen |
M36008 |
Critical Commercial Assays |
Worthington Neonatal Cardiomyocyte Isolation System |
Worthington Biochemical Corporation |
LK003300 |
Cardiolipin Beads |
Echelon Biosciences |
P-BCLP |
Control Beads |
Echelon Biosciences |
P-B000 |
Lipid Strips |
Echelon Biosciences |
P-6002 |
Glutathione Assay Kit |
Cayman Chemicals |
Item 703002 |
EnzyChrom Aconitase Assay Kit |
BioAssay Systems |
EACO-100 |
Cardiolipin Assay Kit, Fluorometric |
BioVision |
K944–100 |
Experimental Models: Cell Lines |
C2C12 myoblast |
ATCC |
CRL-1772 |
HeLa |
ATCC |
CCL-2 |
Neuro-2a (N2a) |
ATCC |
CCL-131 |
Experimental Models: Organisms/Strains |
Mouse: B6SJLF1/J |
The Jackson Laboratory |
JAX: 100012 |
Mouse: C57BL/6J |
|
JAX: 000664 |
Mouse: Mtln knockout mice backcrossed to C57BL/6J |
This paper |
N/A |
Oligonucleotides |
DNA oligonucleotides |
Integrated DNA Technologies (IDT) |
See Table S4
|
Custom Dicer-substrate siRNAs targeting human Mtln |
IDT |
See Table S4
|
Scrambled Dicer-substrate siRNA |
IDT |
IDT #1074346 |
Negative Control Dicer-substrate siRNA |
IDT |
IDT #1074354 |
Recombinant DNA |
Multiplex Genome Engineering Using CRISPR/Cas Systems. |
|
Addgene Plasmid #42229 |
Multiplex Genome Engineering Using CRISPR/Cas Systems. |
|
Addgene Plasmid #42230 |
Ad5CMVcytoLacZ (Ad-ßgal) |
University of Iowa Viral Vector Core |
VVC-U of Iowa-3554 |
Ad5TRENC116 (Ad-Mtln)) |
University of Iowa Viral Vector Core |
(Iowa-custom, Ad5TREnc116) |
Ad5CMVeGFP (Ad-GFP) |
University of Iowa Viral Vector Core |
VVC-U of Iowa-4 |
Software and Algorithms |
coxpresdb ver.6 |
NA |
http://coxpresdb.jp/ |
ToppFun gene ontology enrichment tool; ToppGene Suite |
NA |
https://toppgene.cchmc.org/ |
RONN v3.2 |
NA |
https://www.strubi.ox.ac.uk/RONN |
IUPred |
NA |
iupred.enzim.hu/ |
PrDOS |
NA |
prdos.hgc.jp/cgi-bin/top.cgi |