Table 1.
Unique genes detected in P. graminis PHS1 that are putatively involved in sulfur metabolism
| Gene ida | COG id | COG description | COG category | COG category description |
|---|---|---|---|---|
| PHS1_B03995 | COG1116 | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component | P | Inorganic ion transport and metabolism |
| PHS1_A11055 | COG1116 | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component | P | Inorganic ion transport and metabolism |
| PHS1_A11010 | COG1116 | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component | P | Inorganic ion transport and metabolism |
| PHS1_B06885 | COG0715 | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | P | Inorganic ion transport and metabolism |
| PHS1_B06855 | COG0715 | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | P | Inorganic ion transport and metabolism |
| PHS1_B03985 | COG0715 | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | P | Inorganic ion transport and metabolism |
| PHS1_A11020 | COG0715 | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | P | Inorganic ion transport and metabolism |
| PHS1_A11045 | COG0715 | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | P | Inorganic ion transport and metabolism |
| PHS1_A11005 | COG0600 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component | P | Inorganic ion transport and metabolism |
| PHS1_B04000 | COG0600 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component | P | Inorganic ion transport and metabolism |
| PHS1_A11050 | COG0600 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component | P | Inorganic ion transport and metabolism |
| PHS1_B05945 | COG2015 | Alkyl sulfatase BDS1 and related hydrolases, metallo-beta-lactamase superfamily | Q | Secondary metabolites biosynthesis, transport and catabolism |
| PHS1_B05970 | COG2015 | Alkyl sulfatase BDS1 and related hydrolases, metallo-beta-lactamase superfamily | Q | Secondary metabolites biosynthesis, transport and catabolism |
| PHS1_B05965 | COG2015 | Alkyl sulfatase BDS1 and related hydrolases, metallo-beta-lactamase superfamily | Q | Secondary metabolites biosynthesis, transport and catabolism |
| PHS1_A10100 | COG1018 | Ferredoxin-NADP reductase/putative dimethyl sulfoxide reductase chain YnfF | C | Energy production and conversion |
| PHS1_B07225 | COG2141 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | H | Coenzyme transport and metabolism |
| PHS1_P00230 | COG2761 | Predicted dithiol-disulfide isomerase, DsbA family | O | Post-translational modification, protein turnover, chaperones |
| PHS1_B13030 | COG0520 | Selenocysteine lyase/Cysteine desulfurase | E | Amino acid transport and metabolism |
| PHS1_B04875 | COG0155 | Sulfite reductase, beta subunit (hemoprotein) | P | Inorganic ion transport and metabolism |
aPHS1: strain, A: Chromosome 1, B: Chromosome 2, and P: Plasmid