Schematic representation of model substrates for the
in vivo targeting assay (see details in
Materials and Methods). The C‐terminal opsin tag or the native glycosylation sites in ppαF (Ng
et al,
1996) and SytII (N32; Kida
et al,
2000) allow substrate insertion into the ER in the correct topology to be detected by glycosylation. The glycosylation sites on the model substrates are depicted as “Y”. N‐ or C‐terminal 3xHA tags allow immunoprecipitation or Western blot detection of the substrates. The residues of Bos1 used in the substrates are shown in the diagram. To enforce type I topology of the Bos1‐BirA substrate, additional sequences were introduced at the N‐terminus (mouse synaptotagmin II (SytII) residues 1–18, 20–45, 61–65) and C‐terminus (insertion of six lysines) of the Bos1‐TMD.