Table 3.

Annotation of small RNAs

Sample name	known_miRNA	novel_miRNA	rRNA	snoRNA	tRNA	snRNA	repeat	other	total
CK−1	2,100,459	3,133,891	542,451	1692	77,938	11,003	102,088	2,918,607	8,888,129
CK−2	2,614,045	2,776,978	139,310	582	20,908	8354	71,225	2,611,725	8,243,127
CK−3	4,397,452	5,903,941	252,238	713	33,641	2463	43,649	8,122,265	18,756,362
LS−1	3,887,397	4,541,837	253,857	1400	33,878	2553	73,639	5,125,302	13,919,863
LS−2	3,290,026	4,541,837	236,226	949	84,760	3637	63,418	4,444,753	12,665,606
LS−3	2,034,046	1,910,369	282,526	819	82,212	10,012	84,969	2,172,853	6,577,806