Antibodies |
|
|
CD28 antibody |
Thermo Fisher Scientific |
Cat # 16-0289-85; RRID: AB_468927 |
PI3 Kinase p85 antibody |
Cell Signaling Technology |
Cat # 4292; RRID: AB_329869 |
Alexa Fluor 647 CD3ε antibody |
BioLegend |
Cat # 317312; RRID: AB_571883 |
Pacific Blue PD-1 antibody |
BioLegend |
Cat # 329915; RRID: AB_1877194 |
PE/Cy7 PD-L1 antibody |
BioLegend |
Cat # 329717; RRID: AB_2561686 |
ZAP70 pY493 antibody |
Cell Signaling Technology |
Cat # 2704S; RRID: AB_2217457 |
PE mouse PD-1 antibody |
BioLegend |
Cat # 109103; RRID: AB_313420 |
APC mouse PD-1 antibody |
BioLegend |
Cat # 109111; RRID: AB_10613470 |
PE mouse PD-L1 antibody |
BioLegend |
Cat # 124307; RRID: AB_2073557 |
PE mouse isotype antibody |
BioLegend |
Cat # 400607; RRID: N/A |
APC mouse isotype antibody |
BioLegend |
Cat # 400611; RRID: N/A |
Pacific Blue PD-1 antibody |
BioLegend |
Cat # 329915; RRID: AB_1877194 |
PE-Cy7 PD-L1 antibody |
BioLegend |
Cat # 329717; RRID: AB_2561686 |
Pacific Blue isotype antibody |
BioLegend |
Cat # 400151; RRID: N/A |
PE-Cy7 isotype antibody |
BioLegend |
Cat # 400302; RRID: N/A |
TruStain FcX |
BioLegend |
Cat # 422301; RRID: N/A |
PE PD-1 antibody |
Thermo Fisher Scientific |
Cat # 12-9969-41; RRID: AB_10733013 |
PE PD-L1 antibody |
Thermo Fisher Scientific |
Cat # 12-5983-41; RRID: AB_11042721 |
BV421 CD45 antibody |
BioLegend |
Cat # 368521; RRID: AB_2687374 |
Alexa700 CD11b antibody |
BioLegend |
Cat # 101222; RRID: AB_493705 |
PE/Cy5 CD11c antibody |
BioLegend |
Cat # 301609; RRID: AB_493579 |
Alexa488 CD3 antibody |
BioLegend |
Cat # 300319; RRID: AB_493690 |
PE PD-L1 antibody |
BioLegend |
Cat # 329705; RRID: AB_940366 |
APC PD-1 antibody |
BioLegend |
Cat # 329907; RRID: AB_940473 |
PE isotype antibody |
BioLegend |
Cat # 400313; RRID: N/A |
APC isotype antibody |
BioLegend |
Cat # 400119; RRID: N/A |
AF647 mouse TCRβ antibody |
BioLegend |
Cat # 109217; RRID: AB_493347 |
Mouse PD-1 blockade antibody (J43) |
Thermo Fisher Scientific |
Cat # 16-9985-82; RRID: AB_469307 |
Isotype antibody for J43 |
Thermo Fisher Scientific |
Cat # 16-4888-81; RRID: AB_470171 |
Human PD-1 blockade antibody (Pembrolizumab) |
BioVison Inc |
Cat # A1306; RRID: N/A |
Isotype antibody for Pembrolizumab |
BioLegend |
Cat # 403701; RRID: N/A |
Chemicals, Peptides, and Recombinant Proteins |
|
|
1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) |
Avanti Polar Lipids |
Cat # 850457C |
1,2-dioleoyl-sn-glycero-3-[(N-(5-amino-1-carboxypentyl) iminodiacetic acid) succinyl] (nickel salt, DGS-NTA-Ni) |
Avanti Polar Lipids |
Cat # 790404C |
1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine-N- (lissamine Rhodamine B sulfonyl) (ammonium salt, Rhodamine-PE) |
Avanti Polar Lipids |
Cat # 810158C |
N-(4,4-Difluoro-5,7-Dimethyl-4-Bora-3a,4a-Diaza-s-Indacene-3-Propionyl)-1,2-Dihexadecanoyl-sn-Glycero-3-Phosphoethanolamine (Triethylammonium Salt, BODIPY-PE) |
Thermo Fisher Scientific |
Cat # D3800 |
Poly-D-Lysine |
Sigma-Aldrich |
Cat # P6407 |
CLIP-Surface 547 |
New England Biolabs |
Cat # S9233S |
SNAP-Surface Alexa Fluor 647 |
New England Biolabs |
Cat # S9136S |
SNAP-Cell 505-Star |
New England Biolabs |
Cat # S9103S |
SNAP-Cell TMR-Star |
New England Biolabs |
Cat # S9105S |
SNAP-Cell 647-SiR |
New England Biolabs |
Cat # S9102S |
SEE super antigen |
Toxin Technology |
Cat # ET404 |
Strep-SNAP-PD-1EX-His10
|
This study |
N/A |
Strep-SNAP-PD-1EX
|
This study |
N/A |
Strep-SNAP-PD-1(K78A)EX -His10
|
This study |
N/A |
Strep-SNAP-PD-L1EX-His10
|
This study |
N/A |
Strep-SNAP-PD-L2EX-His10
|
This study |
N/A |
Strep-SNAP-B7.2EX-His10
|
This study |
N/A |
Mouse MHC-I H2Kb |
Enfu Hui |
N/A |
Mouse PD-1EX-His |
Sino Biological |
Cat # 50124-m08h |
Mouse PD-L1EX-His |
Sino Biological |
Cat # 50010-m08h |
Mouse B7.2EX-His |
Sino Biological |
Cat # 50068-m08h |
Mouse ICAMEX-His |
Sino Biological |
Cat # 50440-m08h |
SIINFEKL peptide |
Anaspec |
Cat # AS-60193-1 |
Live/Dead Aqua |
Thermo Fisher Scientific |
Cat # L34966
|
Critical Commercial Assays |
|
|
Human IL-2 ELISA MAX Deluxe |
BioLegend |
Cat # 431804 |
CytoTox 96 Non-Radioactive Cytotoxicity Assay kit |
Promega |
Cat # G1780 |
Cell Line Nucleofector Kit L |
LONZA |
Cat # VACA-1005 |
Quantum R-PE MESF |
Bangs Laboratories Inc |
Cat # 827 |
Quantum APC MESF |
Bangs Laboratories Inc |
Cat # 823 |
Experimental Models: Cell Lines |
|
|
HEK293T |
Ronald Vale |
N/A |
Jurkat E6.1 T cells |
Arthur Weiss |
N/A |
Raji B cells |
Ronald Vale |
N/A |
HEK293F |
Andrew Ward |
N/A |
Jurkat T cells with PD-1-mGFP |
Enfu Hui |
N/A |
Raji B cells with PD-L1-mCherry |
Enfu Hui |
N/A |
OT-I |
Ananda Goldrath |
N/A |
EL4 |
Ira Mellman |
N/A |
Oligonucleotides |
|
|
See Table S2 for the list of Oligos |
N/A |
N/A |
Recombinant DNA |
|
|
See Table S3 for the list of recombinant DNA |
N/A |
N/A |
Software and Algorithms |
|
|
ImageJ |
NIH |
https://imagej.nih.gov/ij/ |
Micro-Manager |
Open Imaging |
https://micro-manager.org/ |
AccPbFRET |
(Roszik et al., 2008) |
http://biophys.med.unideb.hu/accpbfret/ |
GraphPad Prism 5 |
GraphPad Software |
https://www.graphpad.com/scientific-software/prism/ |
FlowJo |
FlowJo, LLC |
https://www.flowjo.com/ |