Table 2.
Summary of Microsatellite Molecular Inversion Probes
| Region | Chromosome | Begin | End | Repeat unit | Repeat type | No. of MIPs | No. of MIPs passing QC |
|---|---|---|---|---|---|---|---|
| AS1 | chr11 | 416541 | 416572 | AAT | Trinucleotide | 2 | 1 |
| AS11 | chr6 | 377496 | 377514 | COMPLEX | Trinucleotide | 2 | 1 |
| AS12 | chr6 | 372592 | 372612 | AAT | Trinucleotide | 2 | 1 |
| AS13 | chr6 | 372579 | 372621 | ATA | Trinucleotide | 1 | 1 |
| AS14 | chr5 | 1218960 | 1218986 | AAC, AAT, ATTATGATA | Trinucleotide | 2 | 2 |
| AS15 | chr13 | 2587730 | 2587758 | ATA | Trinucleotide | 2 | 1 |
| AS19 | chr4 | 533507 | 533554 | ATA, ATT | Trinucleotide | 2 | 2 |
| AS2 | chr11 | 416832 | 416890 | AAT | Trinucleotide | 2 | 1 |
| AS20 | chr4 | 536917 | 536949 | TAA | Trinucleotide | 1 | 0 |
| AS21 | chr4 | 528577 | 528599 | TTA | Trinucleotide | 2 | 0 |
| AS25 | chr10 | 1324819 | 1324890 | ATT,ACT | Trinucleotide | 1 | 0 |
| AS3 | chr11 | 417708 | 417739 | TAA | Trinucleotide | 2 | 0 |
| AS31 | chr6 | 806342 | 806371 | ATT | Trinucleotide | 1 | 1 |
| AS32 | chr12 | 1623232 | 1623297 | ATT | Trinucleotide | 1 | 1 |
| AS34 | chr12 | 2034957 | 2034977 | ATT,ACT | Trinucleotide | 2 | 1 |
| AS4 | chr11 | 418074 | 418095 | TAA | Trinucleotide | 2 | 2 |
| AS7 | chr6 | 899277 | 899296 | ATT | Trinucleotide | 1 | 1 |
| AS8 | chr6 | 894235 | 894269 | ATT | Trinucleotide | 2 | 2 |
| Ara2 | chr11 | 416315 | 416359 | TAA | Trinucleotide | 2 | 2 |
| B7M19 | chr10 | 1356173 | 1356265 | T | Mononucleotide | 2 | 1 |
| PFG377 | chr12 | 2045854 | 2045894 | TAT | Trinucleotide | 2 | 1 |
| PfPK2 | chr12 | 1611244 | 1611352 | TAA | Trinucleotide | 1 | 0 |
| PolyAlpha | chr4 | 532213 | 532302 | ATT | Trinucleotide | 1 | 0 |
| TA1 | chr6 | 899867 | 900004 | TAT | Trinucleotide | 1 | 0 |
| TA109 | chr6 | 801053 | 801073 | ACT, AATAATGATAAT | Trinucleotide | 2 | 1 |
| TA40 | chr10 | 1322613 | 1322772 | AAT | Trinucleotide | 1 | 1 |
| TA60 | chr13 | 2588764 | 2588796 | AAT | Trinucleotide | 2 | 1 |
| TA81 | chr5 | 1214362 | 1214391 | ATA | Trinucleotide | 2 | 1 |
| TA87 | chr6 | 374755 | 374808 | AAC, AAT | Trinucleotide | 1 | 0 |
Abbreviations: MIC, molecular inversion probe; QC, quality control.