Table 2.
List of polymorphic and high quality markers (SSRs and InDels) screened with UPIC scripts. UPIC scores are the number of species with unique allele patterns out of 20 species tested
| Marker | UPIC score | Marker | UPIC score | Marker | UPIC score | Marker | UPIC score | Marker | UPIC score |
|---|---|---|---|---|---|---|---|---|---|
| NPRL_cont01020a | 16 | Indel-003 | 7 | NPRL_cont00952a | 5 | RM15C11 | 4 | NPRL_cont00474a | 2 |
| NPRL_cont00528b | 12 | NPRL_cont00098a | 6 | NPRL_cont01065a | 5 | RN2F12 | 4 | NPRL_cont00521a | 2 |
| Indel-016 | 10 | NPRL_cont00393a | 6 | NPRL_ABCLW | 4 | RN34G06 | 4 | NPRL_cont00816a | 2 |
| NPRL_cont00843a | 10 | NPRL_cont00659a | 6 | NPRL_cont00578a | 4 | AS1RN32E12 | 4 | RN2H11 | 2 |
| NPRL_cont00405a | 9 | NPRL_cont01572a | 6 | NPRL_cont00274a | 4 | NPRL_cont00179a | 4 | RN36A01 | 2 |
| NPRL_cont00874a | 9 | NPRL_cont01622a | 6 | Ah-229 | 4 | NPRL_cont00401a | 4 | AS1RN3E10 | 2 |
| NPRL_cont00994a | 9 | NPRL_cont01294a | 6 | NPRL_cont00544a | 4 | RN3E10 | 4 | NPRL_A5DQD | 1 |
| NPRL_cont00736a | 9 | NPRL_BVJSE | 5 | NPRL_cont00596a | 4 | NPRL_cont00346a | 3 | NPRL_cont00235a | 1 |
| AS1RI1F06 | 9 | NPRL_BVZOG | 5 | NPRL_cont00741a | 4 | NPRL_cont00629b | 3 | NPRL_cont00479a | 1 |
| NPRL_cont00201a | 8 | NPRL_cont00151a | 5 | NPRL_cont00834a | 4 | NPRL_cont00686a | 3 | NPRL_cont00971a | 1 |
| NPRL_cont00793a | 8 | NPRL_cont00630a | 5 | NPRL_cont00981a | 4 | NPRL_cont00841a | 3 | NPRL_cont01170a | 1 |
| NPRL_cont01183a | 8 | NPRL_cont00658a | 5 | NPRL_cont01029a | 4 | NPRL_cont01080a | 3 | NPRL_cont01321a | 1 |
| NPRL_cont00626a | 7 | NPRL_cont01145a | 5 | NPRL_cont01663a | 4 | RN2C06 | 3 | NPRL_cont01454a | 1 |
| NPRL_cont00629a | 7 | NPRL_cont01409a | 5 | NPRL_cont01893b | 4 | RN3B12 | 3 | NPRL_cont01787a | 1 |
| NPRL_cont01077a | 7 | NPRL_cont01709a | 5 | NPRL_cont02088a | 4 | NPRL_cont00983a | 3 | NPRL_cont01984a | 0 |
| NPRL_cont01310a | 7 | NPRL_cont02651a | 5 | NPRL_cont02318a | 4 | NPRL_cont01604a | 3 | Indel-032 | 0 |
| NPRL_AAJZM | 7 | RM14E11 | 5 | NPRL_cont02432a | 4 | NPRL_cont00150a | 2 | ||
| NPRL_cont01357a | 7 | NPRL_cont00461a | 5 | RM11H06 | 4 | NPRL_cont00183a | 2 |