Table 5.
Top 5 gene-sets significantly enriched in the NSIP group (GSEA)
Gene Set | NES | p value | q value |
---|---|---|---|
Interferon-gamma-mediated signaling pathway (biological process) | 2.48 | < 0.001 | < 0.001 |
Defense response to virus (biological process) | 2.42 | < 0.001 | < 0.001 |
Response to type I Interferon (biological process) | 2.30 | < 0.001 | < 0.001 |
Regulation of Interferon-gamma production (biological process) | 2.27 | < 0.001 | < 0.001 |
Regulation of Interleukin-12 production (biological process) | 2.26 | < 0.001 | 0.005 |
NES Normalized Enrichment Score
q value: False Discovery Ratio
The positive enrichment score indicated a correlation with the NSIP group. Ontologies are indicated in brackets