Skip to main content
. 2018 Jul 26;9:962. doi: 10.3389/fpls.2018.00962

Table 1.

miRNA families differentially regulated by light.

miRNA1 family Light conditions2 Plant species3 Reference
miR156/157 W, FR, B, UV-A, UV-B, phyB mutant, pif4 mutant, LD/SD, bagging treatment Ath, Gma, Mdo, Osa, Ppy, Ptr, Stu, Tae, Zma Zhou et al., 2007, 2016; Jia et al., 2009; Casati, 2013; Wang et al., 2013; Bhogale et al., 2014; Tsai et al., 2014; Li et al., 2015; Sun et al., 2015, 2018; Qu et al., 2016; Lin et al., 2017; Qian et al., 2017; Xie et al., 2017
miR167 W, FR, UV-B, phyB mutant, pif4 mutant, L/D cycles, LD/SD, bagging treatment Ath, Gma, Mdo, Osa, Ptr, Tae Zhou et al., 2007; Jia et al., 2009; Siré et al., 2009; Wang et al., 2013; Li et al., 2014, 2015; Sun et al., 2015, 2018; Qu et al., 2016; Lin et al., 2017
miR170/171 W, UV-B, phyB mutant, pif4 mutant, L/D cycles, LD/SD, bagging treatment Ath, Gma, Mdo, Osa, Tae, Zma Zhou et al., 2007; Siré et al., 2009; Casati, 2013; Wang et al., 2013; Fan et al., 2015; Li et al., 2015; Sun et al., 2015, 2018; Qu et al., 2016; Lin et al., 2017
miR165/166 W, FR, R, UV-B, phyB mutant, pif4 mutant, LD/SD Ath, Gma, Osa, Ptr, Stu, Zma Zhou et al., 2007; Jia et al., 2009; Casati, 2013; Li et al., 2014, 2015; Sun et al., 2015, 2018; Lin et al., 2017; Qiao et al., 2017
miR398 W, R, UV-A, UV-B, L/D cycles, LD/SD, bagging treatment Ath, Gma, Mdo, Ptr, Stu, Zma Zhou et al., 2007, 2016; Jia et al., 2009; Siré et al., 2009; Casati, 2013; Li et al., 2015; Qu et al., 2016; Lin et al., 2017; Qiao et al., 2017
miR159/319 W, R, UV-B, phyB mutant, pif4 mutant, LD/SD, Ath, Gma, Osa, Ptr, Tae Zhou et al., 2007; Jia et al., 2009; Wang et al., 2013; Tsai et al., 2014; Li et al., 2015; Sun et al., 2015; Lin et al., 2017; Sun et al., 2018
miR172 R, B, UV-B, pif4 mutant, LD/SD, bagging treatment Ath, Mdo, Gma, Stu, Zma Jung et al., 2007; Zhou et al., 2007; Martin et al., 2009; Casati, 2013; Li et al., 2015; Qu et al., 2016; Sun et al., 2018
miR396 W, FR, UV-A, UV-B, phyB mutant, LD/SD Ath, Gma, Osa, Zma Casadevall et al., 2013; Casati, 2013; Li et al., 2014, 2015; Sun et al., 2015; Zhou et al., 2016; Lin et al., 2017
miR408 W, R, UV-B, phyB mutant, LD/SD, bagging treatment Ath, Gma, Mdo, Osa, Ptr, Stu Jia et al., 2009; Zhang et al., 2014; Li et al., 2015; Sun et al., 2015; Qu et al., 2016; Lin et al., 2017; Qiao et al., 2017
miR160 W, R, UV-B, phyB mutant, pif4 mutant, bagging treatment Ath, Mdo, Osa, Ptr Zhou et al., 2007; Jia et al., 2009; Sun et al., 2015, 2018; Qu et al., 2016; Lin et al., 2017
miR169 W, UV-B, phyB mutant, pif4 mutant, LD/SD Ath, Gma, Osa, Ptr Zhou et al., 2007; Jia et al., 2009; Li et al., 2015; Sun et al., 2015, 2018; Lin et al., 2017
miR164 UV-B, phyB mutant, bagging treatment Mdo, Ptr, Tae, Osa, Zma Jia et al., 2009; Casati, 2013; Wang et al., 2013; Sun et al., 2015; Qu et al., 2016
miR395 W, UV-B, bagging treatment Ath, Mdo, Ptr, Tae, Zma Jia et al., 2009; Casati, 2013; Wang et al., 2013; Qu et al., 2016; Lin et al., 2017
miR399 W, R, UV-B, bagging treatment Ath, Mdo, Ptr, Stu, Zma Jia et al., 2009; Casati, 2013; Qu et al., 2016; Lin et al., 2017; Qiao et al., 2017
miR168 FR, UV-B, L/D cycles, LD/SD Ath, Gma, Ptr Jia et al., 2009; Siré et al., 2009; Li et al., 2014, 2015
miR393 W, UV-B, bagging treatment Ath, Mdo, Ptr Zhou et al., 2007; Jia et al., 2009; Qu et al., 2016; Lin et al., 2017
miR858 W, bagging treatment Ath, Mdo Qu et al., 2016; Sharma et al., 2016; Wang et al., 2016; Lin et al., 2017
miR1511 B, phyB mutant, LD/SD, bagging treatment Ath, Gma, Mdo, Osa Li et al., 2015; Sun et al., 2015; Qu et al., 2016; Zhou et al., 2016
miR163 W, R, B Ath Chung et al., 2016; Lin et al., 2017; Sun et al., 2018
miR390 W, UV-B, LD/SD Ath, Gma, Ptr Jia et al., 2009; Li et al., 2015; Lin et al., 2017
miR482 R, LD/SD, bagging treatment Gma, Mdo, Stu Li et al., 2015; Qu et al., 2016; Qiao et al., 2017
miR391 B, UV-A, bagging treatment Ath, Mdo Qu et al., 2016; Zhou et al., 2016
miR394 FR, R, pif4 mutant Ath, Gma Li et al., 2014; Sun et al., 2018
miR397 R, pif4 mutant Ath, Stu Qiao et al., 2017; Sun et al., 2018
miR403 LD/SD, bagging treatment Gma, Mdo Li et al., 2015; Qu et al., 2016
miR444 UV-B, phyB mutant Osa, Zma Casati, 2013; Sun et al., 2015
miR903
miR472 R, UV-B, pif4 mutant Ath, Ptr Jia et al., 2009; Sun et al., 2018
miR477 R, bagging treatment Mdo, Stu Qu et al., 2016; Qiao et al., 2017
miR530 FR, phyB mutant Gma, Osa Li et al., 2014; Sun et al., 2015
miR535 phyB mutant, bagging treatment Mdo, Osa Sun et al., 2015; Qu et al., 2016
miR827 R, phyB mutant Osa, Stu Sun et al., 2015; Qiao et al., 2017
miR833 W, pif4 mutant Ath Lin et al., 2017; Sun et al., 2018
miR1507 FR, LD/SD Gma Li et al., 2014, 2015
miR1508
miR2111 R, B, UV-A Ath Zhou et al., 2016; Sun et al., 2018
miR2876 phyB mutant, L/D cycles Osa Sun et al., 2015; Li et al., 2016
miR5072 B, phyB mutant Ath, Osa Sun et al., 2015; Zhou et al., 2016
miR5139
miR5368 LD/SD, phyB mutant Gma, Osa Li et al., 2015; Sun et al., 2015

In this table, we present a summary of the different miRNAs that respond to two or more light treatments. 1miRNA families reported to be regulated by light in at least two papers have been included. miRNA families are ordered according to the number of papers reporting their light regulation. 2W, white light; FR, far-red light; R, red light; B, blue light; L/D, light/dark; LD/SD, long days/short days. 3Ath, Arabidopsis thaliana; Gma, Glycine max (soybean); Mdo, Malus x domestica (apple); Osa, Oryza sativa (rice); Ppy, Pyrus pyrifolia (Chinese sand pear); Ptr, Populus tremula (aspen); Stu, Solanum tuberosum (potato); Tae, Triticum aestivum (wheat); Zma, Zea mays (maize).