Skip to main content
. 2018 Aug 13;6:e5307. doi: 10.7717/peerj.5307

Table 6. KEGG Pathways enriched in high-risk and low-risk groups by using GSEA.

NAME SIZE ES NES NOM p-val FDR q-val FWER p-val Rank at max Leading edge
KEGG_PRIMARY_IMMUNODEFICIENCY 35 0.783950 2.003367 0.002036 0.080199 0.032 5022 tags=63%, list=9%, signal=69%
KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION 258 0.503302 1.751613 0.016227 0.351688 0.258 13393 tags=46%, list=23%, signal=60%
KEGG_JAK_STAT_SIGNALING_PATHWAY 151 0.462485 1.585162 0.051020 0.356088 0.496 11252 tags=35%, list=19%, signal=43%
KEGG_PATHWAYS_IN_CANCER 324 0.296756 1.015304 0.442386 0.570524 0.968 12772 tags=28%, list=22%, signal=36%
KEGG_MAPK_SIGNALING_PATHWAY 265 0.353983 1.239951 0.226804 0.527153 0.881 11268 tags=29%, list=19%, signal=35%
KEGG_PROTEASOME 46 −0.542264 −1.310828 0.249049 1 0.849 11204 tags=54%, list=19%, signal=67%
KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY 55 −0.342477 −1.059409 0.361581 1 0.958 6866 tags=33%, list=12%, signal=37%
KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT 38 −0.365953 −0.983674 0.481132 1 0.969 6863 tags=32%, list=12%, signal=36%
KEGG_OXIDATIVE_PHOSPHORYLATION 118 −0.269338 −0.724989 0.681050 1 0.992 11643 tags=38%, list=20%, signal=48%
KEGG_SPLICEOSOME 123 −0.362891 −0.936620 0.566473 1 0.978 5025 tags=24%, list=9%, signal=26%