Table 2.
Enriched Gene Ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways for 644 genes in the association weight matrix (AWM)
| GO term/KEGG pathway | Category | P-value | AWM gene count | Gene count in each category |
|---|---|---|---|---|
| Glycoprotein biosynthetic process | GO_BP | 6.09E-04 | 10 | 80 |
| Glycoprotein metabolic process | GO_BP | 6.19E-04 | 11 | 97 |
| Transmembrane transport | GO_BP | 0.0030 | 23 | 389 |
| Protein amino acid glycosylation | GO_BP | 0.0044 | 8 | 69 |
| Biopolymer glycosylation | GO_BP | 0.0044 | 8 | 69 |
| Glycosylation | GO_BP | 0.0044 | 8 | 69 |
| Generation of a signal involved in cell-cell signaling | GO_BP | 0.0058 | 6 | 39 |
| Enzyme linked receptor protein signaling pathway | GO_BP | 0.0084 | 11 | 138 |
| Neurotransmitter secretion | GO_BP | 0.0155 | 4 | 18 |
| Multicellular organismal movement | GO_BP | 0.0170 | 3 | 7 |
| Musculoskeletal movement | GO_BP | 0.0170 | 3 | 7 |
| Neuropeptide signaling pathway | GO_BP | 0.0177 | 6 | 51 |
| Ion transport | GO_BP | 0.0187 | 25 | 511 |
| Biological adhesion | GO_BP | 0.0214 | 17 | 306 |
| Cell adhesion | GO_BP | 0.0214 | 17 | 306 |
| Extracellular structure organization | GO_BP | 0.0217 | 7 | 73 |
| Cation homeostasis | GO_BP | 0.0219 | 9 | 115 |
| Exocytosis | GO_BP | 0.0238 | 6 | 55 |
| Cellular calcium ion homeostasis | GO_BP | 0.0332 | 6 | 60 |
| Regulation of cell morphogenesis | GO_BP | 0.0334 | 5 | 41 |
| Calcium ion homeostasis | GO_BP | 0.0375 | 6 | 62 |
| Synaptic vesicle transport | GO_BP | 0.0411 | 3 | 11 |
| Cellular metal ion homeostasis | GO_BP | 0.0446 | 6 | 65 |
| Metal ion transport | GO_BP | 0.0476 | 15 | 285 |
| Cell-cell adhesion | GO_BP | 0.0495 | 9 | 135 |
| Calcium ion binding | GO_MF | 4.39E-05 | 33 | 528 |
| Ion binding | GO_MF | 7.70E-05 | 99 | 2,439 |
| Cation binding | GO_MF | 2.45E-04 | 96 | 2,415 |
| Metal ion binding | GO_MF | 2.60E-04 | 95 | 2,387 |
| Sialyltransferase activity | GO_MF | 0.0022 | 5 | 20 |
| Ion channel activity | GO_MF | 0.0044 | 17 | 268 |
| Substrate-specific channel activity | GO_MF | 0.0049 | 17 | 271 |
| Passive transmembrane transporter activity | GO_MF | 0.0056 | 17 | 275 |
| Channel activity | GO_MF | 0.0056 | 17 | 275 |
| α-N-acetylneuraminate α-2,8-sialyltransferase activity | GO_MF | 0.0077 | 3 | 5 |
| Manganese ion binding | GO_MF | 0.0105 | 7 | 65 |
| Transition metal ion binding | GO_MF | 0.0307 | 62 | 1,698 |
| ATP binding | GO_MF | 0.0354 | 40 | 1,018 |
| Cation:cation antiporter activity | GO_MF | 0.0379 | 3 | 11 |
| Adenyl ribonucleotide binding | GO_MF | 0.0397 | 40 | 1,027 |
| Cation channel activity | GO_MF | 0.0476 | 10 | 165 |
| O-Glycan biosynthesis | KEGG_Pathway | 0.0020 | 6 | 30 |
| Axon guidance | KEGG_Pathway | 0.0026 | 11 | 114 |
| Glycosphingolipid biosynthesis | KEGG_Pathway | 0.0083 | 4 | 14 |
| Phosphatidylinositol signaling system | KEGG_Pathway | 0.0219 | 7 | 71 |
| Lysosome | KEGG_Pathway | 0.0232 | 9 | 113 |
| MAPK1 signaling pathway | KEGG_Pathway | 0.0271 | 15 | 257 |
| Arrhythmogenic right ventricular cardiomyopathy (ARVC) | KEGG_Pathway | 0.0498 | 6 | 65 |
1MAPK = mitogen-activated protein kinase.