Table 3.
Oligonucleotide primers and probes used for bacteriological analysis
Primers/probes | Sequence (5′–3′) | Tm (°C) | Product size (bp) | |
---|---|---|---|---|
Escherichia coli | Forward | CATGCCGCGTGTATGAAGAA | 57 | 96 |
Reverse | CGGGTAACGTCAATGAGCAAA | |||
Probe | AGGTATTAACTTTACTCCCTTCCTC | |||
Lactobacilli | Forward | GAGGCAGCAGTAGGGAATCTTC | 55.7 | 126 |
Reverse | CAACAGTTACTCTGACACCCGTTCTTC | |||
Probe | AAGAAGGGTTTCGGCTCGTAAAACTCTGTT | |||
Total bacteria | Forward | ACTCCTACGGGAGGCAGCAG | 64.5 | 200 |
Reverse | ATTACCGCGGCTGCTGG |