Table 1.

Common bean TCP transcripts with miR319 binding sites.

Gene name	Alignment (penalty score)	Expression (FPKM)
		Roots	Nodules
pvu-miR319d	22 CUUCCUCGAGGGGAAGUCAGGU 1
	: . : . : : : : : : : : : : : : : :
Phvul.005G067950	1362 CAGAGGGGACCCCUUCAGUCCA 1383 (3.5)	16	8
pvu-miR319d	22 CUUCCUCGAGGGGAAGUCAGGU 1
	: . : . : : : : : : : : : : : : : :
Phvul.0llGl56900	1974 CAGAGGGGACCCCUUCAGUCCA 1995 (3.5)	2	3
pvu-miR319d	22 CUUCCUCGAGGGGAAGUCAGGU 1
	: : . : . : . : : : : : : : :
Phvul.005G097200	1317 CUUGGCCUUUCUCUUCACUCCU 1338 (6.0)	11	11
pvu-miR319d	22 CUUCCUCGAGGGGAAGUCAGGU 1
	: : : : : : : : : : : : : : : :
Phvul.011G136115	1533 CAAAGUGAGACCCUUCAGUCCA 1554 (7.5)	0	0

Pairing of four TCP putative target genes identified with a miR319 binding site (Formey et al., 2015). Watson-Crick base pairing is indicated by two dots, G-U base pairing by one dot and mismatches are empty. Penalty scores shown in parenthesis were calculated as described by Jones-Rhoades and Bartel (2004). Expression values (FPKM, Fragments Per Kilo Million) from Phaseolus vulgaris release v2.1 from Phytozome 12 database, are shown.