Table 1.
Databases for long non coding RNA.
| Database | Functions/Information | Website |
|---|---|---|
| LNCipedia | Annotated human database lncRNAs transcript sequences and structural patterns | www.lncipedia.org |
| DIANA-LncBase | Predicted miRNA recognition elements (MREs) on human and mouse lncRNAs experimentally verified and computationally | http://diana.imis.athena.innovation.gr/DianaTool |
| CHIPBase | An open decoding transcriptional database for regulatory networks of non coding RNAs and protein coding genes from CHIP-seq data | Deepbase.sysu.edu.cn/chipbase |
| Noncode v.3.0 | Annotation of long non coding RNAs integratively excluding t-RNAs and rRNAs | www.ebi.ac.uk/miriam/main/collections/MIR:00000248 |
| lncRNAdb | The reference database for functional comprehensive annotations of eukaryotic long non coding RNA (lncRNAs) | www.lncrnadb.org |
| lnRNome | Preliminary built compared with human genome program. | Genome.igib.res.in/lncRNome |
| The functional lncRNAs database | A database of mammalian long non protein coding repository transcripts to search a specific lncRNAs. Currently, the database contains lncRNAs from Human, Mouse and Rat | www.valadkhanlab.org |