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. 2018 Jun 11;30(7):1645–1660. doi: 10.1105/tpc.18.00168

Table 1. SNP Markers Ranking in the Top 10 Associations out of 2352 SNPs on Chromosome II of the Populus v2.2 Reference Genome Assembly.

Native Environment_2008 Clatskanie_2012
SNP Marker P Value DF SNP Marker P Value DF
scaffold_2_6958732 0.0000321 682 scaffold_2_10947571* 0.000574308 382
scaffold_2_782169 0.0000581 683 scaffold_2_286493 0.000722477 365
scaffold_2_6956134 0.0000704 683 scaffold_2_11628510 0.000765244 348
scaffold_2_10945723* 0.0000752 681 scaffold_2_358872 0.001743983 363
scaffold_2_10948215* 0.0000861 683 scaffold_2_11990358 0.003210959 380
scaffold_2_6976928 0.0000905 682 scaffold_2_10948215* 0.00379822 382
scaffold_2_10944029* 0.0000909 683 scaffold_2_10944029* 0.004179331 382
scaffold_2_10947571* 0.0000928 683 scaffold_2_23037473 0.004660356 381
scaffold_2_15761393 0.000307 679 scaffold_2_7096789 0.00473181 382
scaffold_2_15757811 0.000562 675 scaffold_2_7109565 0.00484312 382

Bold font and asterisks indicate SNP markers located in the Populus gene model Potri.002G146400 ranking in the top 10 across two test environments. DF, degrees of freedom. Bold SNPs were represented among the top 10 SNPs across both environments.