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. Author manuscript; available in PMC: 2019 Sep 1.
Published in final edited form as: Pancreas. 2018 Sep;47(8):924–936. doi: 10.1097/MPA.0000000000001136

TABLE 4.

‘Pathogenic’ Germline Variants (Bin 1)

Gene cDNA Nucleotide Change rsID Population Reference
ATM c.5932G>T rs587779852 US, Europe 153,154
ATM c.8266A>T rs371638537 US 58
BRCA1 c.5263_5264insC rs80357906 (Ashkenazi Jewish) US, Canada, Poland, Israel 65,82,83,155159
BRCA1 c.68_69delAG* rs386833395 (Ashkenazi Jewish) US 69,160
BRCA1 c.66_67delAG* rs796856605 (Ashkenazi Jewish) US, Israel, Canada 82,83,155,158,159,161,162
BRCA2 c.5946delT rs80359550 (Ashkenazi Jewish) US, Israel, Canada 69,8183,156,158,159,161166
BRCA2 c.6591_6592delTG rs80359605 Germany, UK 80,167,168
BRCA2 c.9227G>A rs80359187 Germany, UK 80,168
BRCA2 c.10095delCinsGAATTATATCT rs276174803 Germany, UK 80,168
CDKN2A c.457G>T rs45476696 US 60,69,169,170
CDKN2A c.377T>A rs104894098 US 60,68,69,169,171
CDKN2A c.301G>T rs104894094 US, Italy 60,68,69,111,169
CDKN2A c.225_243del19 rs730881674 Netherlands, US 68,69,169,172174
CDKN2A c.148C>T rs864622636 Germany, US 69,175
CDKN2A c.−34G>T rs1800586 US 68,69,169,170
CHEK2 c.1100delC rs555607708 Germany, Poland, US 153,157,176
PALB2 c.509_510delGA rs515726124 Czech Republic, Poland, US 60,89,157
PALB2 c.508_509delAG - Europe 88
PALB2 c.172_175delTTGT rs180177143 Poland, US 65,157,177
SPINK1 c.194+2T>C rs148954387 (Japanese) Japan, Germany 26,178

All germline variants are reported in patients with pancreatic cancer in multiple studies, and all variants except one SPINK1 variant are reported in familial pancreatic cancer cases.

*,†

Each symbol represents a group of variants that result in same cDNA and protein change.

Absent in familial pancreatic cancer study.

cDNA indicates complementary DNA; US, United States; UK, United Kingdom.