Table 2.
Pathways associated with candidate differentially abundant proteins (DAPs) between ‘Tunisia’ and ‘White’ pomegranate cultivars in TP1_SP1 and TP2_SP2 comparisons.
| Pathway | Common DAP | Regulation | KO id | Annotation [EC no.] | Fold (TP1/SP1) | P value | Fold (TP2/SP2) | P value |
|---|---|---|---|---|---|---|---|---|
| Anthocyanin biosynthesis | Gglean022014.1 | Up | K12938 | anthocyanidin 5,3-O-glucosyltransferase (GT1) [EC:2.4.1.-] | 1.46 | 0.03 | 1.38 | 0.00 |
| Gglean030887.1 | Up | K08237 | 1.59 | 0.05 | 1.36 | 0.00 | ||
| Stilbenoid, diarylheptanoid biosynthesis | Gglean022299.1 | Up | K00517 | — | 1.51 | 0.01 | 1.77 | 0.00 |
| Gglean017162.1 | Up | K13260 | isoflavone 2′-hydroxylase (I2,H) [EC:1.14.13.89] | 1.54 | 0.00 | 1.90 | 0.02 | |
| Gglean020115.1 | Up | K13065 | shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133] | 1.58 | 0.01 | 1.95 | 0.02 | |
| Gglean017092.1 | Up | 1.74 | 0.01 | 2.46 | 0.00 | |||
| Gglean030413.1 | Up | K00487 | trans-cinnamate 4-monooxygenase [EC:1.14.13.11] | 1.63 | 0.01 | 1.31 | 0.00 | |
| Flavonoid biosynthesis | Gglean024451.1 | Up | K13082 | bifunctional dihydroflavonol 4-reductase (DFR) [EC:1.1.1.219] | 1.86 | 0.04 | 1.96 | 0.00 |
| Gglean009951.1 | Up | K00660 | chalcone synthase (CHS) [EC:2.3.1.74] | 2.23 | 0.01 | 2.32 | 0.00 | |
| Gglean021885.1 | Up | K05278 | flavonol synthase (FS) [EC:1.14.11.23] | 1.57 | 0.00 | 1.76 | 0.03 | |
| Gglean002595.1 | Up | 1.21 | 0.04 | 1.40 | 0.02 | |||
| Gglean002270.1 | Up | 1.61 | 0.03 | 2.12 | 0.00 | |||
| Gglean024933.1 | Up | K00475 | flavonoid 3′5′-hydroxylase (F35H) [EC:1.14.11.9] | 2.08 | 0.01 | 2.41 | 0.00 | |
| Gglean020650.1 | Up | 2.33 | 0.00 | 2.16 | 0.00 | |||
| Phenylpropanoid biosynthesis | Gglean004667.1 | Up | K13229 | 2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2] | 1.64 | 0.01 | 1.42 | 0.03 |
| Gglean005438.1 | Up | 1.31 | 0.01 | 1.34 | 0.00 | |||
| Gglean008923.1 | Up | K01904 | 4-coumarate–CoA ligase [EC:6.2.1.12] | 1.24 | 0.01 | 2.22 | 0.00 | |
| Gglean004749.1 | Up | K01188 | beta-glucosidase [EC:3.2.1.21] | 1.25 | 0.01 | 1.30 | 0.01 | |
| Gglean030344.1 | Up | K13066 | caffeic acid 3-O-methyltransferase [EC:2.1.1.68] | 1.51 | 0.00 | 3.00 | 0.00 | |
| Gglean015152.1 | Up | 1.44 | 0.01 | 2.20 | 0.00 | |||
| Gglean015001.1 | Up | K00083 | cinnamyl-alcohol dehydrogenase [EC:1.1.1.195] | 1.46 | 0.01 | 1.78 | 0.00 | |
| Gglean015223.1 | Up | 1.26 | 0.01 | 1.29 | 0.03 | |||
| Gglean015003.1 | Up | 1.52 | 0.03 | 1.42 | 0.01 | |||
| Gglean023090.1 | Up | K10775 | phenylalanine ammonia-lyase [EC:4.3.1.24] | 1.60 | 0.02 | 1.37 | 0.00 | |
| Gglean026319.1 | Up | 1.98 | 0.01 | 1.41 | 0.00 | |||
| Gglean025624.1 | Up | 2.48 | 0.01 | 1.23 | 0.01 | |||
| Gglean017092.1 | Up | K13065 | shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133] | 1.74 | 0.01 | 1.73 | 0.00 |