Table 1.
Genome summary.
Organism | Total coding genes | Genome size (bp) | %GC | Location of | Genes on right | Genes on right | Genes on left | Genes on left | Genes on forward | Genes on reverse | Reference |
---|---|---|---|---|---|---|---|---|---|---|---|
terminus start (bp) | replichore, forward strand | replichore, reverse strand | replichore, reverse strand | replichore, forward strand | strand | strand | |||||
Lactobacillus acidophilus NCFM | 1834 | 1993560 | 34.7 | 1106894 | 821 (44.7%) | 230 (12.6%) | 183 (10.0%) | 600 (32.7%) | 1421 (77.4%) | 413 (22.5%) | Altermann et al., 2005 |
Lactobacillus amylovorus GRL 1112 | 1696 | 2067702 | 38.2 | 1211255 | 766 (45.1%) | 247 (14.6%) | 185 (10.9%) | 498 (29.3%) | 1264 (74.5%) | 432 (25.5%) | Broadbent et al., 2013 |
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 | 1549 | 1864998 | 49.7 | 915000 | 632 (40.8%) | 151 (9.7%) | 185 (11.9%) | 581 (37.5%) | 1173 (78.4%) | 346 (21.6%) | Cato et al., 1983; Ojala et al., 2010 |
Lactobacillus crispatus ST1 | 1939 | 2043161 | 36.9 | 1139949 | 849 (43.8%) | 254 (13.1%) | 193 (9.9%) | 643 (33.1%) | 1492 (77.0%) | 447 (23.0%) | Nakamura, 1981; Kant et al., 2011 |
Lactobacillus gasseri ATCC33323 | 1772 | 1894360 | 35.3 | 1004754 | 788 (44.4%) | 174 (9.8%) | 224 (12.6%) | 586 (33.1%) | 1374 (77.6%) | 398 (22.4%) | Johnson et al., 2015 |
Lactobacillus helveticus CNRZ32 | 1704 | 2225962 | 36.9 | 1329141 | 766 (44.9%) | 234 (13.7%) | 136 (8.0%) | 568 (33.3%) | 1334 (78.3%) | 370 (21.7%) | Azcarate-Peril et al., 2008 |