Table 2.
Scenario | Statistics | BPP | No. of delimited OTUs | |||
---|---|---|---|---|---|---|
PP | GMYC | bPTP-h | bPTP-ML | PTP-h | ||
I | Median | 0.99 | 2 | 8 | 5 | 11 |
Mean | 0.93 | 3.38 | 11.14 | 8.44 | 12.78 | |
Sd. | 0.19 | 2.73 | 9.49 | 8.12 | 7.99 | |
Min. | 0.00 | 2 | 2 | 2 | 2 | |
Max. | 1.00 | 32 | 37 | 39 | 34 | |
II | Median | 1.00 | 1 | 1 | 1 | 1 |
Mean | 0.91 | 1.71 | 3.18 | 2.39 | 1.49 | |
Sd. | 0.24 | 1.08 | 4.00 | 3.17 | 1.91 | |
Min. | 0.00 | 1 | 1 | 1 | 1 | |
Max. | 1.00 | 13 | 20 | 20 | 18 | |
III | Median | 0.02 | 2 | — | 3 | — |
Mean | 0.38 | 2.14 | — | 4.38 | — | |
Sd. | 0.46 | 1.50 | — | 3.09 | — | |
Min. | 0.00 | 1 | — | 1 | — | |
Max. | 1.00 | 10 | — | 10 | — | |
IV | Median | 1.00 | 1 | — | 1 | — |
Mean | 0.97 | 1.04 | — | 1.00 | — | |
Sd. | 0.15 | 0.30 | — | 0 | — | |
Min. | 0.01 | 1 | — | 1 | — | |
Max. | 1.00 | 7 | — | 1 | — | |
V | Median | 0.25 | 2 | — | 5 | — |
Mean | 0.42 | 2.14 | — | 5.06 | — | |
Sd. | 0.44 | 1.74 | — | 3.40 | — | |
Min. | 0.00 | 1 | — | 1 | — | |
Max. | 1.00 | 10 | — | 10 | — |
Note: Posterior probabilities for correct delimitation models are given for the results from BPP: of the one-species model for Scenario I; of the two-species model for Scenarios II and III; of the five-species model for Scenario IV; and of the four-species model for Scenario V. The numbers of delimited OTUs for each simulated species are reported for both GMYC and PTP.
BPP Bayesian Phylogenetics and Phylogeography; GMYC generalized mixed Yule-coalescent; PTP Poisson tree processes; bPTP-h Bayesian PTP heuristic; bPTP-ML Bayesian PTP maximum likelihood; PTP-h PTP heuristic; PP posterior probability; OTU operational taxonomic unit.